Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.56□□□□□ -1.84
ARFGAP3Q9NP61 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.56□□□□□ -1.84
ARFGAP3Q9NP61 RNU6-1281P-201ENST00000516223 105 ntBASIC3.56□□□□□ -1.84
ARFGAP3Q9NP61 RNU6-572P-201ENST00000516724 80 ntBASIC3.56□□□□□ -1.84
ARFGAP3Q9NP61 RNU6-703P-201ENST00000516946 107 ntBASIC3.56□□□□□ -1.84
ARFGAP3Q9NP61 SNORA31.19-201ENST00000517079 126 ntBASIC3.56□□□□□ -1.84
ARFGAP3Q9NP61 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.56□□□□□ -1.84
ARFGAP3Q9NP61 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.56□□□□□ -1.84
ARFGAP3Q9NP61 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
ARFGAP3Q9NP61 HIF1AP1-201ENST00000553642 175 ntBASIC3.56□□□□□ -1.84
ARFGAP3Q9NP61 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.56□□□□□ -1.84
ARFGAP3Q9NP61 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.56□□□□□ -1.84
ARFGAP3Q9NP61 MIR4506-201ENST00000584693 77 ntBASIC3.56□□□□□ -1.84
ARFGAP3Q9NP61 AC004852.3-201ENST00000614131 326 ntBASIC3.56□□□□□ -1.84
ARFGAP3Q9NP61 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.56□□□□□ -1.84
ARFGAP3Q9NP61 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.56□□□□□ -1.84
ARFGAP3Q9NP61 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 MTND4P14-201ENST00000435799 1354 ntBASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 Y_RNA.9-201ENST00000362354 101 ntBASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 MYL8P-204ENST00000431574 518 ntBASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 AC073063.1-201ENST00000434352 607 ntBASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 MTATP6P7-201ENST00000453315 681 ntBASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 AC112206.3-201ENST00000514578 389 ntBASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 RNU6-835P-201ENST00000516974 104 ntBASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 AC024220.1-201ENST00000603675 484 ntBASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 AC010338.1-201ENST00000621823 717 ntBASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 AP003122.6-201ENST00000623831 495 ntBASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
ARFGAP3Q9NP61 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 RNU6-1090P-201ENST00000364065 94 ntBASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 RNU6-371P-201ENST00000364283 108 ntBASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 SNORD37.1-201ENST00000390968 65 ntBASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 RNA5SP44-201ENST00000410446 133 ntBASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 RN7SKP58-201ENST00000411010 305 ntBASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 Z99755.1-201ENST00000414048 380 ntBASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 RPL21P90-201ENST00000415692 466 ntBASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 HMGB1P9-201ENST00000429856 646 ntBASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 VN1R34P-201ENST00000447387 883 ntBASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 AC115115.1-201ENST00000449927 248 ntBASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 AC025518.1-201ENST00000479856 347 ntBASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 MTCO3P9-201ENST00000506989 781 ntBASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 RNA5SP385-201ENST00000515947 110 ntBASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 RNU6-1178P-201ENST00000516674 107 ntBASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 AL157687.1-201ENST00000554853 619 ntBASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 SNORA51-201ENST00000606420 132 ntBASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 ELF2P3-201ENST00000445099 1506 ntBASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
ARFGAP3Q9NP61 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 RNU6-799P-201ENST00000363567 107 ntBASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 RNU6-715P-201ENST00000365204 103 ntBASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 Y_RNA.402-201ENST00000383972 102 ntBASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 RNU6-1179P-201ENST00000384667 107 ntBASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 SNORA40C-201ENST00000391285 128 ntBASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 BMS1P22-201ENST00000414726 313 ntBASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 USP9YP27-201ENST00000418455 438 ntBASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 BPY2DP-201ENST00000422208 265 ntBASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 AC005300.1-201ENST00000428401 373 ntBASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 AL360271.2-201ENST00000447710 161 ntBASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 AC003071.1-201ENST00000451219 789 ntBASIC3.53□□□□□ -1.84
ARFGAP3Q9NP61 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms