Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 NDUFB4P7-201ENST00000423198 363 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 DDX3P2-201ENST00000446138 111 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 RPL39P6-201ENST00000448289 150 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 AL137159.1-201ENST00000452808 512 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 KATNBL1P6-201ENST00000453433 915 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 FO393415.2-201ENST00000480085 343 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 AC091965.2-201ENST00000512324 613 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 CYCSP2-201ENST00000558168 301 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 UBE2L4-201ENST00000587688 464 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 AL139344.1-201ENST00000605228 195 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 AC068276.1-201ENST00000605793 379 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 AP002791.1-201ENST00000623291 381 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 U2.21-201ENST00000637295 81 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 MIR6767-201ENST00000637302 66 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 SNRPEP3-201ENST00000338402 276 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 RNU4-51P-201ENST00000364206 140 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 RNU1-148P-201ENST00000384472 162 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 AL356432.1-201ENST00000405809 419 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 RPS20P15-201ENST00000412792 311 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 AL592310.1-201ENST00000414330 671 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 CYCSP48-201ENST00000417124 323 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 RNFT1P2-201ENST00000443064 757 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 MRPL42P4-201ENST00000453267 443 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 MRPS17P3-201ENST00000465453 385 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 AC132942.1-201ENST00000486753 483 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 RNA5SP102-201ENST00000516865 106 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 ZNF92P2-201ENST00000600543 1059 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 AC008121.1-201ENST00000603244 268 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 MTND1P37-201ENST00000636562 264 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 AP000648.3-201ENST00000623539 4507 ntBASIC1.16□□□□□ -2.22
KIAA1549Q9HCM3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 MIR95-201ENST00000385072 81 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 AC007742.1-201ENST00000425789 329 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 MED14P1-201ENST00000430517 648 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 AL365400.1-201ENST00000431854 640 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 RPL7P34-201ENST00000433316 712 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 ELOCP26-201ENST00000436067 329 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 AL121601.2-201ENST00000438019 707 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 MTCYBP11-201ENST00000447254 1109 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 MTND2P24-201ENST00000453434 806 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 AP1S2P1-201ENST00000457344 379 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 AL049874.1-201ENST00000489560 388 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 AC020699.1-201ENST00000505161 445 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 AC010460.2-201ENST00000509054 677 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 RNU6-528P-201ENST00000516926 100 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 NACAP3-201ENST00000552100 481 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 AL391813.1-201ENST00000603098 260 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 MIR6504-201ENST00000613520 61 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 AC104763.3-201ENST00000613765 618 ntBASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.15□□□□□ -2.23
KIAA1549Q9HCM3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 RNU6-492P-201ENST00000363035 104 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 MIR150-201ENST00000385048 84 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 NDUFS5P1-201ENST00000405668 289 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 CR848007.2-201ENST00000424918 787 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 MTND5P25-201ENST00000430499 799 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 AC092393.1-201ENST00000439625 742 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 AC026410.2-201ENST00000460281 156 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 AC087343.1-201ENST00000477341 475 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 MTCYBP35-201ENST00000503630 1137 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 AC091860.1-201ENST00000505723 432 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 AC026741.1-201ENST00000605892 482 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 AL589743.7-201ENST00000612637 233 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 ZNF702P-202ENST00000434269 1966 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 SNORA16B-201ENST00000364674 135 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 RNU6-955P-201ENST00000410497 104 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 AL512844.2-201ENST00000433990 593 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 AC004223.1-201ENST00000479840 271 ntBASIC1.14□□□□□ -2.23
KIAA1549Q9HCM3 RNA5SP112-201ENST00000515937 99 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms