Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDH9Q9HC56 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDH9Q9HC56 SEPT14P2-201ENST00000453405 183 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDH9Q9HC56 AL356010.1-201ENST00000456364 102 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 RNU6-261P-201ENST00000459506 102 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDH9Q9HC56 AL163973.1-201ENST00000484753 577 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDH9Q9HC56 AC116353.2-201ENST00000505332 712 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 PRDX4P1-201ENST00000507189 574 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 RBBP4P6-201ENST00000508098 202 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 AC104806.1-201ENST00000508720 308 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 SEPT14P4-201ENST00000513445 186 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 Y_RNA.689-201ENST00000516589 107 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 RNU6-835P-201ENST00000516974 104 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 RNA5SP503-201ENST00000517047 117 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 FO082796.1-201ENST00000523795 183 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDH9Q9HC56 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDH9Q9HC56 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDH9Q9HC56 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDH9Q9HC56 AC002545.1-201ENST00000592511 181 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 AL670379.4-201ENST00000605279 254 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 AC007998.5-201ENST00000622938 237 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 FER-210ENST00000628534 558 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDH9Q9HC56 MIR3662-201ENST00000637030 95 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 MIR622-201ENST00000638396 96 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 MTND5P17-201ENST00000418405 1603 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 API5P2-201ENST00000397055 1498 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 CKAP2P1-201ENST00000555477 2049 ntBASIC3.14□□□□□ -1.91
PCDH9Q9HC56 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 RNU6-1287P-201ENST00000362914 107 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 Y_RNA.255-201ENST00000364581 97 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 Y_RNA.390-201ENST00000383932 102 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 RNU6-1060P-201ENST00000384664 107 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 Y_RNA.576-201ENST00000384781 102 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 RNU6-908P-201ENST00000410160 94 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 RNU6-1077P-201ENST00000410506 102 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 AC092809.3-201ENST00000415453 231 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 YPEL5P1-201ENST00000419731 367 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 RPL27AP8-201ENST00000424277 446 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 HMGB1P27-201ENST00000431429 603 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 WASF1P1-201ENST00000447560 1131 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 RPS23P3-201ENST00000470993 430 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 RPS26P21-201ENST00000475397 348 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 AP004217.1-201ENST00000480579 346 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 AC092436.1-201ENST00000506450 503 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 AC105417.1-201ENST00000514691 285 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 SNORA70.16-201ENST00000516390 95 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 RNU6-1256P-201ENST00000516539 103 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 RN7SKP282-201ENST00000516824 299 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 RN7SKP258-201ENST00000517151 304 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 NRON-201ENST00000517270 370 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 AC104763.2-201ENST00000604179 382 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 AC008945.2-201ENST00000606056 604 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 AC130324.3-201ENST00000614165 542 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 AL110115.1-201ENST00000614396 364 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 AC024940.5-201ENST00000622889 474 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 AC011155.2-201ENST00000623202 216 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 MIR3651-201ENST00000630427 90 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 AC073346.2-201ENST00000624724 2058 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.13□□□□□ -1.91
PCDH9Q9HC56 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCDH9Q9HC56 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCDH9Q9HC56 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
PCDH9Q9HC56 AL035425.3-201ENST00000564206 4996 ntBASIC3.12□□□□□ -1.91
PCDH9Q9HC56 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCDH9Q9HC56 SNORD115-7-201ENST00000365306 82 ntBASIC3.12□□□□□ -1.91
PCDH9Q9HC56 SNORA70.4-201ENST00000365509 134 ntBASIC3.12□□□□□ -1.91
PCDH9Q9HC56 RNU6-14P-201ENST00000384630 106 ntBASIC3.12□□□□□ -1.91
PCDH9Q9HC56 SNORD67-201ENST00000390833 111 ntBASIC3.12□□□□□ -1.91
PCDH9Q9HC56 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.12□□□□□ -1.91
PCDH9Q9HC56 RNA5SP111-201ENST00000411386 101 ntBASIC3.12□□□□□ -1.91
PCDH9Q9HC56 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.12□□□□□ -1.91
PCDH9Q9HC56 ZNF90P2-204ENST00000419323 1075 ntBASIC3.12□□□□□ -1.91
PCDH9Q9HC56 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDH9Q9HC56 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDH9Q9HC56 HMGB1P31-201ENST00000437242 427 ntBASIC3.12□□□□□ -1.91
PCDH9Q9HC56 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDH9Q9HC56 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDH9Q9HC56 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDH9Q9HC56 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms