Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL356473.1-201ENST00000406203 1408 ntBASIC1.6□□□□□ -2.15
TRIM4Q9C037 Y_RNA.36-201ENST00000362602 112 ntBASIC1.6□□□□□ -2.15
TRIM4Q9C037 U6atac.2-201ENST00000408644 118 ntBASIC1.6□□□□□ -2.15
TRIM4Q9C037 RNU6-575P-201ENST00000411326 105 ntBASIC1.6□□□□□ -2.15
TRIM4Q9C037 VN1R36P-201ENST00000414936 291 ntBASIC1.6□□□□□ -2.15
TRIM4Q9C037 EDDM3CP-201ENST00000415977 425 ntBASIC1.6□□□□□ -2.15
TRIM4Q9C037 AC074117.2-201ENST00000417130 397 ntBASIC1.6□□□□□ -2.15
TRIM4Q9C037 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.6□□□□□ -2.15
TRIM4Q9C037 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.6□□□□□ -2.15
TRIM4Q9C037 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.6□□□□□ -2.15
TRIM4Q9C037 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.6□□□□□ -2.15
TRIM4Q9C037 AC079203.1-201ENST00000487972 404 ntBASIC1.6□□□□□ -2.15
TRIM4Q9C037 AC091860.1-201ENST00000505723 432 ntBASIC1.6□□□□□ -2.15
TRIM4Q9C037 RNU1-92P-201ENST00000517017 135 ntBASIC1.6□□□□□ -2.15
TRIM4Q9C037 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.6□□□□□ -2.15
TRIM4Q9C037 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.6□□□□□ -2.15
TRIM4Q9C037 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.6□□□□□ -2.15
TRIM4Q9C037 AC016911.1-201ENST00000613297 452 ntBASIC1.6□□□□□ -2.15
TRIM4Q9C037 U4atac.1-201ENST00000618345 95 ntBASIC1.6□□□□□ -2.15
TRIM4Q9C037 AP002791.1-201ENST00000623291 381 ntBASIC1.6□□□□□ -2.15
TRIM4Q9C037 AC104820.1-201ENST00000624183 307 ntBASIC1.6□□□□□ -2.15
TRIM4Q9C037 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.59□□□□□ -2.15
TRIM4Q9C037 RNU5E-8P-201ENST00000363502 116 ntBASIC1.59□□□□□ -2.15
TRIM4Q9C037 RNU1-42P-201ENST00000364033 160 ntBASIC1.59□□□□□ -2.15
TRIM4Q9C037 Y_RNA.295-201ENST00000364918 102 ntBASIC1.59□□□□□ -2.15
TRIM4Q9C037 MIR217-201ENST00000384817 110 ntBASIC1.59□□□□□ -2.15
TRIM4Q9C037 GTF2IP7-202ENST00000436677 309 ntBASIC1.59□□□□□ -2.15
TRIM4Q9C037 HSPE1P24-201ENST00000450782 238 ntBASIC1.59□□□□□ -2.15
TRIM4Q9C037 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.59□□□□□ -2.15
TRIM4Q9C037 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.59□□□□□ -2.15
TRIM4Q9C037 RPS20P20-201ENST00000460498 340 ntBASIC1.59□□□□□ -2.15
TRIM4Q9C037 FO393415.2-201ENST00000480085 343 ntBASIC1.59□□□□□ -2.15
TRIM4Q9C037 RPS27AP10-201ENST00000496103 208 ntBASIC1.59□□□□□ -2.15
TRIM4Q9C037 RNU6-528P-201ENST00000516926 100 ntBASIC1.59□□□□□ -2.15
TRIM4Q9C037 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.59□□□□□ -2.15
TRIM4Q9C037 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.59□□□□□ -2.15
TRIM4Q9C037 AC135279.1-201ENST00000543493 504 ntBASIC1.59□□□□□ -2.15
TRIM4Q9C037 ARL2BPP2-201ENST00000550907 489 ntBASIC1.59□□□□□ -2.15
TRIM4Q9C037 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.59□□□□□ -2.15
TRIM4Q9C037 MIR4255-201ENST00000579351 72 ntBASIC1.59□□□□□ -2.15
TRIM4Q9C037 AC024619.4-201ENST00000580924 316 ntBASIC1.59□□□□□ -2.15
TRIM4Q9C037 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.59□□□□□ -2.15
TRIM4Q9C037 AC243960.4-201ENST00000600532 288 ntBASIC1.59□□□□□ -2.15
TRIM4Q9C037 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.59□□□□□ -2.15
TRIM4Q9C037 AC091304.6-201ENST00000619761 202 ntBASIC1.59□□□□□ -2.15
TRIM4Q9C037 PVT1_3.1-201ENST00000620853 95 ntBASIC1.59□□□□□ -2.15
TRIM4Q9C037 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TRIM4Q9C037 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.59□□□□□ -2.15
TRIM4Q9C037 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
TRIM4Q9C037 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.58□□□□□ -2.16
TRIM4Q9C037 RNU6-492P-201ENST00000363035 104 ntBASIC1.58□□□□□ -2.16
TRIM4Q9C037 RNU6-353P-201ENST00000364266 108 ntBASIC1.58□□□□□ -2.16
TRIM4Q9C037 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.58□□□□□ -2.16
TRIM4Q9C037 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.58□□□□□ -2.16
TRIM4Q9C037 CR848007.2-201ENST00000424918 787 ntBASIC1.58□□□□□ -2.16
TRIM4Q9C037 AL096803.2-201ENST00000450032 677 ntBASIC1.58□□□□□ -2.16
TRIM4Q9C037 ATP5J2P3-201ENST00000451550 258 ntBASIC1.58□□□□□ -2.16
TRIM4Q9C037 MTND3P4-201ENST00000453537 303 ntBASIC1.58□□□□□ -2.16
TRIM4Q9C037 SNORD121B-201ENST00000458838 81 ntBASIC1.58□□□□□ -2.16
TRIM4Q9C037 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.58□□□□□ -2.16
TRIM4Q9C037 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.58□□□□□ -2.16
TRIM4Q9C037 AF131216.2-201ENST00000512316 564 ntBASIC1.58□□□□□ -2.16
TRIM4Q9C037 AP005435.4-201ENST00000529514 284 ntBASIC1.58□□□□□ -2.16
TRIM4Q9C037 ADAM3B-201ENST00000569937 840 ntBASIC1.58□□□□□ -2.16
TRIM4Q9C037 SNORD53B-201ENST00000577887 78 ntBASIC1.58□□□□□ -2.16
TRIM4Q9C037 MIR4765-201ENST00000585007 77 ntBASIC1.58□□□□□ -2.16
TRIM4Q9C037 AC068944.2-201ENST00000610373 403 ntBASIC1.58□□□□□ -2.16
TRIM4Q9C037 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.58□□□□□ -2.16
TRIM4Q9C037 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TRIM4Q9C037 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TRIM4Q9C037 MTND5P30-201ENST00000452896 1731 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 AC110491.1-201ENST00000562191 2010 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 MTND5P10-201ENST00000603719 1809 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.57□□□□□ -2.16
TRIM4Q9C037 SNORA7.1-201ENST00000363750 139 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 Y_RNA.205-201ENST00000364128 113 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.57□□□□□ -2.16
TRIM4Q9C037 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 AC092393.1-201ENST00000439625 742 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 AC098831.1-201ENST00000440661 216 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.57□□□□□ -2.16
TRIM4Q9C037 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.57□□□□□ -2.16
TRIM4Q9C037 RPS4XP11-201ENST00000446897 772 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.57□□□□□ -2.16
TRIM4Q9C037 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.57□□□□□ -2.16
TRIM4Q9C037 AC005410.1-202ENST00000460347 485 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 AC010460.2-201ENST00000509054 677 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.57□□□□□ -2.16
TRIM4Q9C037 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.57□□□□□ -2.16
TRIM4Q9C037 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TRIM4Q9C037 MIR3126-201ENST00000577443 74 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 AC124283.4-201ENST00000581815 456 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 AP000238.1-201ENST00000608759 426 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 AC013476.2-201ENST00000614456 459 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 AC022709.1-201ENST00000615967 87 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.57□□□□□ -2.16
TRIM4Q9C037 AC007490.1-201ENST00000624321 703 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 AL159972.1-201ENST00000625150 448 ntBASIC1.57□□□□□ -2.16
TRIM4Q9C037 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TRIM4Q9C037 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms