Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 SNORA68.1-201ENST00000364537 132 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 Y_RNA.465-201ENST00000384293 102 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 U3.20-201ENST00000390909 217 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AL513475.1-201ENST00000406602 315 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 CCNG1P1-201ENST00000406783 885 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AP000275.1-201ENST00000411943 390 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 USP9YP33-201ENST00000412220 421 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AC004965.1-201ENST00000413033 213 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AL451054.2-201ENST00000420896 202 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 USP9YP35-201ENST00000435696 412 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 NDUFA5P4-201ENST00000436704 385 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 COX7BP2-201ENST00000437976 242 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 TAF9P1-201ENST00000445421 515 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 DDX3P2-201ENST00000446138 111 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 TAF9P2-201ENST00000454958 515 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 snoU109.3-201ENST00000459477 145 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 RNA5SP216-201ENST00000516111 123 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 MIR514B-201ENST00000516774 80 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AC005951.2-201ENST00000576282 495 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 MIR4658-201ENST00000584344 65 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AP001269.3-201ENST00000588718 329 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AL139344.1-201ENST00000605228 195 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AC009902.3-201ENST00000606235 2172 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AC131235.4-201ENST00000609288 620 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AC107075.1-201ENST00000613695 314 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AC010133.1-201ENST00000615809 842 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 AC009090.3-201ENST00000616553 565 ntBASIC2.13□□□□□ -2.07
PCDH11XQ9BZA7 SNORA25.9-201ENST00000365087 128 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 RNU6-432P-201ENST00000384196 109 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 RNU6-140P-201ENST00000384566 108 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 AL355143.1-201ENST00000407101 841 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 AC022493.1-201ENST00000492984 337 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 AC022447.3-201ENST00000506865 495 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 AC110760.3-202ENST00000515177 371 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 AC022634.1-201ENST00000520765 532 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 GLYCAM1-201ENST00000546596 285 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 AC087465.1-201ENST00000560574 245 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 AC002545.1-201ENST00000592511 181 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 BX248123.2-201ENST00000606318 124 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 AC239868.4-201ENST00000608318 671 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 FTX_3.1-201ENST00000610451 147 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 TUG1_2.1-201ENST00000614234 87 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 SDR42E1P2-201ENST00000614861 481 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 AL031601.2-202ENST00000622650 282 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 AC116618.1-201ENST00000634617 774 ntBASIC2.12□□□□□ -2.07
PCDH11XQ9BZA7 CCT4P2-201ENST00000233836 1548 ntBASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 Y_RNA.192-201ENST00000363977 102 ntBASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 RNU6-60P-201ENST00000364792 103 ntBASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 MIR888-201ENST00000401186 77 ntBASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 GTF2IP20-201ENST00000431663 360 ntBASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 TPT1P14-201ENST00000448018 505 ntBASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 AL031313.1-201ENST00000448435 256 ntBASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 MRPS17P3-201ENST00000465453 385 ntBASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 AC116353.3-201ENST00000511215 249 ntBASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 AL138976.2-201ENST00000563989 694 ntBASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 AL158050.2-201ENST00000605336 568 ntBASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 AC008498.1-201ENST00000613012 531 ntBASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 AL589994.2-201ENST00000621124 579 ntBASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 AC099654.8-201ENST00000637757 681 ntBASIC2.11□□□□□ -2.07
PCDH11XQ9BZA7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PCDH11XQ9BZA7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.1□□□□□ -2.07
PCDH11XQ9BZA7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.1□□□□□ -2.07
PCDH11XQ9BZA7 AL391987.6-201ENST00000305671 199 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms