Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 AC097463.2-201ENST00000421074 142 ntBASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 RN7SL75P-201ENST00000461926 281 ntBASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 RPL36AP48-201ENST00000485521 314 ntBASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 RN7SKP287-201ENST00000516546 266 ntBASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 MIR3118-1-201ENST00000581787 76 ntBASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 AC083760.1-201ENST00000589621 670 ntBASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 AC093424.1-201ENST00000604999 338 ntBASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 AC138749.5-201ENST00000611461 208 ntBASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 AC116165.2-201ENST00000616705 206 ntBASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 MIR5739-201ENST00000619803 80 ntBASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.61□□□□□ -1.83
CHMP4AQ9BY43 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 Y_RNA.111-201ENST00000363248 100 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 RNA5SP21-201ENST00000410917 96 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 OR51A5P-201ENST00000415429 942 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AC009518.2-201ENST00000418056 731 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 MTND4P20-201ENST00000424125 869 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AL590365.1-201ENST00000450788 243 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AC004924.1-201ENST00000480160 781 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AC096576.1-201ENST00000489014 359 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AC008526.1-201ENST00000509149 338 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 SNORA9.3-201ENST00000516383 129 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AC079598.5-201ENST00000547460 117 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AC106782.4-201ENST00000568264 210 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AL670379.10-201ENST00000604330 253 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AL049779.4-201ENST00000604500 156 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AL670379.9-201ENST00000605428 253 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AL031775.1-201ENST00000607014 887 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AC009878.1-201ENST00000621819 340 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 AC010297.1-201ENST00000623948 149 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 HSPA8P4-201ENST00000511877 1920 ntBASIC3.6□□□□□ -1.83
CHMP4AQ9BY43 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 NPM1P11-201ENST00000417106 855 ntBASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 EIF4EP4-201ENST00000424916 578 ntBASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 AC124916.1-201ENST00000444020 547 ntBASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 AC006026.2-201ENST00000457376 180 ntBASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 RPL30P6-201ENST00000475925 342 ntBASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 AC112673.1-201ENST00000513168 575 ntBASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 GTF3AP2-201ENST00000557014 266 ntBASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 AC009127.3-201ENST00000570531 403 ntBASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 RPS15AP11-201ENST00000594193 385 ntBASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 AC078899.2-201ENST00000595282 212 ntBASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 AC025165.5-201ENST00000602802 578 ntBASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 AL022154.1-201ENST00000604698 785 ntBASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 Z75746.1-201ENST00000440243 2080 ntBASIC3.59□□□□□ -1.83
CHMP4AQ9BY43 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.59□□□□□ -1.84
CHMP4AQ9BY43 AC093831.2-201ENST00000624393 3427 ntBASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 HAUS6P2-201ENST00000433254 2404 ntBASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 AL139276.1-201ENST00000311910 1001 ntBASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 OR56A5-201ENST00000340110 738 ntBASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 MIR412-201ENST00000362142 91 ntBASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 RNU5F-7P-201ENST00000363696 115 ntBASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 SNORA51.4-201ENST00000364993 124 ntBASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 AL451074.5-201ENST00000415894 435 ntBASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 AC063976.3-201ENST00000426849 329 ntBASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 RPS3P1-201ENST00000456781 192 ntBASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 ZNF861P-201ENST00000588126 639 ntBASIC3.58□□□□□ -1.84
CHMP4AQ9BY43 AL356266.1-201ENST00000623311 483 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms