Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 MYL8P-204ENST00000431574 518 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 USP9YP28-201ENST00000435142 589 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 AC107401.1-201ENST00000503426 685 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 AC074250.1-201ENST00000511117 192 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 AC105417.1-201ENST00000514691 285 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 RNU6-581P-201ENST00000516214 105 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 AGGF1P4-201ENST00000568249 801 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 AL645944.1-201ENST00000603857 493 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 uc_338.1-201ENST00000612113 180 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 MIR6134-201ENST00000617606 109 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 AL158209.2-201ENST00000619266 216 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 OR5AK4P-201ENST00000635912 903 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 FAM35CP-201ENST00000554755 2470 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 MTND5P1-201ENST00000445440 1375 ntBASIC3.4□□□□□ -1.86
HERPUD2Q9BSE4 AC138915.1-201ENST00000565427 1685 ntBASIC3.4□□□□□ -1.86
HERPUD2Q9BSE4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
HERPUD2Q9BSE4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HERPUD2Q9BSE4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 MIR208A-201ENST00000362287 71 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 RN7SKP226-201ENST00000364912 300 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 Z98749.2-208ENST00000381646 500 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 RNU6-19P-201ENST00000384718 107 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 RNU4-46P-201ENST00000410818 138 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 MTCO3P30-201ENST00000426425 670 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 RPL23AP22-201ENST00000437556 453 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 NANOGNBP1-201ENST00000448444 480 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 AC115115.1-201ENST00000449927 248 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 AC092001.1-201ENST00000453012 261 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 RNU7-63P-201ENST00000459054 62 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 GZMAP1-201ENST00000503054 631 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 FCF1P8-201ENST00000510322 597 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 AC008716.1-201ENST00000511084 513 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 GLYCAM1-201ENST00000546596 285 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 AC011611.1-201ENST00000552179 197 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 AL391646.1-201ENST00000603860 190 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 AC007179.3-201ENST00000604976 235 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 AL356321.1-201ENST00000621360 228 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 AC090617.7-201ENST00000623952 126 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 AC073476.4-201ENST00000628409 72 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 HSPA8P4-201ENST00000511877 1920 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 PWAR6-201ENST00000552334 4618 ntBASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
HERPUD2Q9BSE4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 RNU4-75P-201ENST00000364621 146 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 SNORA75B-201ENST00000384053 137 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 Y_RNA.517-201ENST00000384551 106 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 MIR578-201ENST00000384828 96 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 EEF1A1P40-201ENST00000412883 573 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 MTCO2P19-201ENST00000427513 598 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 AL627311.1-201ENST00000431514 115 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 AL356010.1-201ENST00000456364 102 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 AL441985.1-201ENST00000457727 251 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 RPL21P10-201ENST00000463521 490 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 RPS3AP14-201ENST00000483907 780 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 HMGB1P30-201ENST00000492455 606 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 FAM92A1P2-202ENST00000504766 877 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 TRAV37-201ENST00000553906 342 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 AC245505.1-201ENST00000556398 224 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 MIR4703-201ENST00000577728 79 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 AC015917.1-201ENST00000579654 510 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 AC139792.2-201ENST00000624218 587 ntBASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.39□□□□□ -1.87
HERPUD2Q9BSE4 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms