Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.06□□□□□ -2.08
FOXC2Q99958 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.06□□□□□ -2.08
FOXC2Q99958 MTCYBP43-201ENST00000513621 740 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 RN7SKP258-201ENST00000517151 304 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.06□□□□□ -2.08
FOXC2Q99958 BTF3P12-201ENST00000519620 469 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 AC100870.1-201ENST00000522035 505 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 AP003461.1-201ENST00000528866 78 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.06□□□□□ -2.08
FOXC2Q99958 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.06□□□□□ -2.08
FOXC2Q99958 AC007115.1-201ENST00000546853 234 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 AC123904.3-201ENST00000547218 814 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.06□□□□□ -2.08
FOXC2Q99958 MRPS36P5-201ENST00000551909 298 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 SNRPGP18-201ENST00000553000 214 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 AC002400.1-201ENST00000569310 726 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
FOXC2Q99958 AC103810.6-201ENST00000606708 136 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 AC097468.3-201ENST00000607956 456 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 AC005046.1-201ENST00000608515 625 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 AL355816.2-201ENST00000610049 647 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 MIR7111-201ENST00000619751 72 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.06□□□□□ -2.08
FOXC2Q99958 AC017037.3-201ENST00000625016 472 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.06□□□□□ -2.08
FOXC2Q99958 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.06□□□□□ -2.08
FOXC2Q99958 AC131280.1-202ENST00000624067 4211 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
FOXC2Q99958 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.05□□□□□ -2.08
FOXC2Q99958 Z82209.1-201ENST00000422141 2135 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
FOXC2Q99958 Y_RNA.226-201ENST00000364337 114 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 SNORA67.1-201ENST00000364749 141 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.05□□□□□ -2.08
FOXC2Q99958 RNU1-52P-201ENST00000384190 164 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 RNU6-769P-201ENST00000384407 104 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 MIR19A-201ENST00000384878 82 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 AL139397.2-201ENST00000404529 772 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 AL359704.1-201ENST00000411586 781 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.05□□□□□ -2.08
FOXC2Q99958 AC098592.1-201ENST00000419352 333 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.05□□□□□ -2.08
FOXC2Q99958 AC010099.3-201ENST00000423896 409 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 RPL23AP49-201ENST00000492925 468 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 AC116337.1-201ENST00000509680 687 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.05□□□□□ -2.08
FOXC2Q99958 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
FOXC2Q99958 RNA5SP165-201ENST00000517142 115 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 LRRC34P1-201ENST00000542742 915 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.05□□□□□ -2.08
FOXC2Q99958 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.05□□□□□ -2.08
FOXC2Q99958 AC072039.2-201ENST00000608883 439 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 AC063944.3-201ENST00000609969 533 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 AL607023.1-201ENST00000620045 248 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
FOXC2Q99958 AL356596.1-201ENST00000624230 379 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 FO624990.1-201ENST00000636373 85 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 AC103706.2-201ENST00000638080 240 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 AC016717.2-201ENST00000609089 5141 ntBASIC2.05□□□□□ -2.08
FOXC2Q99958 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
FOXC2Q99958 RNU6-500P-201ENST00000362349 107 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 SNORA38-201ENST00000363946 132 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 Y_RNA.302-201ENST00000364997 102 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 RNU2-68P-201ENST00000410878 191 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 AC080125.1-201ENST00000414888 684 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.04□□□□□ -2.08
FOXC2Q99958 AL593851.1-201ENST00000426171 157 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.04□□□□□ -2.08
FOXC2Q99958 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.04□□□□□ -2.08
FOXC2Q99958 UBE2FP3-201ENST00000436366 524 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.04□□□□□ -2.08
FOXC2Q99958 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.04□□□□□ -2.08
FOXC2Q99958 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.04□□□□□ -2.08
FOXC2Q99958 RNU7-59P-201ENST00000459101 61 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 AL121769.1-201ENST00000469473 401 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 AC004263.1-201ENST00000479327 332 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 AC026801.1-201ENST00000497178 464 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.04□□□□□ -2.08
FOXC2Q99958 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.04□□□□□ -2.08
FOXC2Q99958 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
FOXC2Q99958 SNORA31.6-201ENST00000516241 130 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.04□□□□□ -2.08
FOXC2Q99958 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.04□□□□□ -2.08
FOXC2Q99958 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.04□□□□□ -2.08
FOXC2Q99958 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.04□□□□□ -2.08
FOXC2Q99958 ZNF321P-202ENST00000550843 495 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 AC021739.1-201ENST00000559631 174 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 MIR544B-201ENST00000582372 78 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.04□□□□□ -2.08
FOXC2Q99958 AP000811.1-201ENST00000603803 651 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 AL161798.1-201ENST00000604630 131 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 AC007038.2-201ENST00000608095 740 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 DUSP12P1-201ENST00000612874 516 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 AL031667.3-201ENST00000620124 655 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 AC112204.3-201ENST00000623822 332 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 MIR1291-201ENST00000627649 87 ntBASIC2.04□□□□□ -2.08
FOXC2Q99958 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
FOXC2Q99958 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms