Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.4□□□□□ -2.35
COL12A1Q99715 MIR92A2-201ENST00000385299 75 ntBASIC0.4□□□□□ -2.35
COL12A1Q99715 SFR1P2-201ENST00000421841 730 ntBASIC0.4□□□□□ -2.35
COL12A1Q99715 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
COL12A1Q99715 AC010301.1-201ENST00000473936 355 ntBASIC0.4□□□□□ -2.35
COL12A1Q99715 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.4□□□□□ -2.35
COL12A1Q99715 AC105914.1-201ENST00000511798 226 ntBASIC0.4□□□□□ -2.35
COL12A1Q99715 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.4□□□□□ -2.35
COL12A1Q99715 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC0.4□□□□□ -2.35
COL12A1Q99715 MIR4493-201ENST00000584016 73 ntBASIC0.4□□□□□ -2.35
COL12A1Q99715 AC012254.4-201ENST00000588843 273 ntBASIC0.4□□□□□ -2.35
COL12A1Q99715 AL357075.2-201ENST00000614906 189 ntBASIC0.4□□□□□ -2.35
COL12A1Q99715 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.4□□□□□ -2.35
COL12A1Q99715 RNU4-32P-201ENST00000363404 141 ntBASIC0.4□□□□□ -2.35
COL12A1Q99715 Y_RNA.185-201ENST00000363894 100 ntBASIC0.4□□□□□ -2.35
COL12A1Q99715 Y_RNA.410-201ENST00000383992 113 ntBASIC0.4□□□□□ -2.35
COL12A1Q99715 OR6C73P-201ENST00000546432 358 ntBASIC0.4□□□□□ -2.35
COL12A1Q99715 RNY4P6-201ENST00000363667 96 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 SNORA4.3-201ENST00000365564 137 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 MIR153-1-201ENST00000384914 90 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.39□□□□□ -2.35
COL12A1Q99715 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.39□□□□□ -2.35
COL12A1Q99715 AC007834.2-201ENST00000536310 343 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.39□□□□□ -2.35
COL12A1Q99715 AC136932.1-201ENST00000574771 208 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.39□□□□□ -2.35
COL12A1Q99715 AL627230.6-201ENST00000611129 280 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 MIR365A-201ENST00000362260 87 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 RNA5SP98-201ENST00000363158 137 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 RNU6-335P-201ENST00000364563 113 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 SNORA1.3-201ENST00000384676 136 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 RNA5SP450-201ENST00000411206 102 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 UBE2FP1-201ENST00000416536 447 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 AL606495.1-201ENST00000422100 813 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 RPS29P8-201ENST00000445109 171 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.39□□□□□ -2.35
COL12A1Q99715 AC074051.3-201ENST00000570238 358 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 AC007038.2-201ENST00000608095 740 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.39□□□□□ -2.35
COL12A1Q99715 SNORA3A-201ENST00000364113 130 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 SNORD114-3-201ENST00000364969 75 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 MIR604-201ENST00000384880 94 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 AL512604.1-201ENST00000404812 257 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 AC083875.1-201ENST00000419509 405 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.39□□□□□ -2.35
COL12A1Q99715 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.39□□□□□ -2.35
COL12A1Q99715 RNU7-26P-201ENST00000458980 63 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.39□□□□□ -2.35
COL12A1Q99715 COL6A4P2-205ENST00000509855 506 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 RNU6-567P-201ENST00000516746 107 ntBASIC0.39□□□□□ -2.35
COL12A1Q99715 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.39□□□□□ -2.35
COL12A1Q99715 AP001350.1-201ENST00000601906 1524 ntBASIC0.38□□□□□ -2.35
COL12A1Q99715 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.38□□□□□ -2.35
COL12A1Q99715 MIR26B-201ENST00000362251 77 ntBASIC0.38□□□□□ -2.35
COL12A1Q99715 AC008834.1-201ENST00000511612 175 ntBASIC0.38□□□□□ -2.35
COL12A1Q99715 OR10V3P-201ENST00000525712 725 ntBASIC0.38□□□□□ -2.35
COL12A1Q99715 MIR378F-201ENST00000578143 78 ntBASIC0.38□□□□□ -2.35
COL12A1Q99715 Pinc.1-201ENST00000616452 154 ntBASIC0.38□□□□□ -2.35
COL12A1Q99715 AC132825.8-201ENST00000640783 297 ntBASIC0.38□□□□□ -2.35
COL12A1Q99715 Y_RNA.55-201ENST00000362797 102 ntBASIC0.38□□□□□ -2.35
COL12A1Q99715 MTCO1P56-201ENST00000401674 224 ntBASIC0.38□□□□□ -2.35
COL12A1Q99715 MTCO3P4-201ENST00000419236 787 ntBASIC0.38□□□□□ -2.35
COL12A1Q99715 AC244098.2-201ENST00000422068 99 ntBASIC0.38□□□□□ -2.35
COL12A1Q99715 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.38□□□□□ -2.35
COL12A1Q99715 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.38□□□□□ -2.35
COL12A1Q99715 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC0.38□□□□□ -2.35
COL12A1Q99715 AL358794.1-201ENST00000445689 381 ntBASIC0.38□□□□□ -2.35
COL12A1Q99715 MTATP6P7-201ENST00000453315 681 ntBASIC0.38□□□□□ -2.35
COL12A1Q99715 RPL30P14-201ENST00000482744 348 ntBASIC0.38□□□□□ -2.35
COL12A1Q99715 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.38□□□□□ -2.35
COL12A1Q99715 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.38□□□□□ -2.35
COL12A1Q99715 AP005639.2-201ENST00000527592 928 ntBASIC0.38□□□□□ -2.35
COL12A1Q99715 AC090616.5-202ENST00000582111 297 ntBASIC0.38□□□□□ -2.35
COL12A1Q99715 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.38□□□□□ -2.35
COL12A1Q99715 Y_RNA.28-201ENST00000362554 111 ntBASIC0.37□□□□□ -2.35
COL12A1Q99715 MIR934-201ENST00000401241 83 ntBASIC0.37□□□□□ -2.35
COL12A1Q99715 RPS25P9-201ENST00000435591 252 ntBASIC0.37□□□□□ -2.35
COL12A1Q99715 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.37□□□□□ -2.35
COL12A1Q99715 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.37□□□□□ -2.35
COL12A1Q99715 AC087884.1-201ENST00000469738 328 ntBASIC0.37□□□□□ -2.35
COL12A1Q99715 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
COL12A1Q99715 EIF4EP3-201ENST00000498782 656 ntBASIC0.37□□□□□ -2.35
COL12A1Q99715 AC087272.1-201ENST00000523624 533 ntBASIC0.37□□□□□ -2.35
COL12A1Q99715 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.37□□□□□ -2.35
COL12A1Q99715 AC109635.4-202ENST00000531666 412 ntBASIC0.37□□□□□ -2.35
COL12A1Q99715 RNY1P9-201ENST00000532431 109 ntBASIC0.37□□□□□ -2.35
COL12A1Q99715 MIR5190-201ENST00000581537 80 ntBASIC0.37□□□□□ -2.35
COL12A1Q99715 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.37□□□□□ -2.35
COL12A1Q99715 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.37□□□□□ -2.35
COL12A1Q99715 AC073569.3-201ENST00000619055 682 ntBASIC0.37□□□□□ -2.35
COL12A1Q99715 RNU1-58P-201ENST00000362413 163 ntBASIC0.37□□□□□ -2.35
COL12A1Q99715 RNU6-733P-201ENST00000410759 104 ntBASIC0.37□□□□□ -2.35
COL12A1Q99715 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.37□□□□□ -2.35
COL12A1Q99715 RPL23AP6-201ENST00000446637 472 ntBASIC0.37□□□□□ -2.35
COL12A1Q99715 AC079448.1-201ENST00000449377 373 ntBASIC0.37□□□□□ -2.35
COL12A1Q99715 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.37□□□□□ -2.35
COL12A1Q99715 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.37□□□□□ -2.35
COL12A1Q99715 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.37□□□□□ -2.35
COL12A1Q99715 RPS27P22-201ENST00000478056 241 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms