Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AL159972.1-201ENST00000625150 448 ntBASIC2.07□□□□□ -2.08
CDX2Q99626 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.07□□□□□ -2.08
CDX2Q99626 AC097655.1-201ENST00000635075 318 ntBASIC2.07□□□□□ -2.08
CDX2Q99626 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CDX2Q99626 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CDX2Q99626 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.07□□□□□ -2.08
CDX2Q99626 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.07□□□□□ -2.08
CDX2Q99626 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CDX2Q99626 AL138713.1-201ENST00000624026 2130 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CDX2Q99626 AC009902.3-201ENST00000606235 2172 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
CDX2Q99626 SNORA23-201ENST00000365128 182 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 RNU6-1072P-201ENST00000384703 107 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 RNU6-443P-201ENST00000384780 107 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 RNA5SP354-201ENST00000391247 136 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CDX2Q99626 AL590084.2-201ENST00000401481 382 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 AL356421.1-201ENST00000403255 413 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 RNU2-33P-201ENST00000410344 192 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 AC106883.1-201ENST00000418805 562 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 AC099548.1-201ENST00000421443 426 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 AL590383.1-201ENST00000428602 75 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.06□□□□□ -2.08
CDX2Q99626 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.06□□□□□ -2.08
CDX2Q99626 HMGB1P31-201ENST00000437242 427 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 SNRPEP7-201ENST00000438350 220 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.06□□□□□ -2.08
CDX2Q99626 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CDX2Q99626 AP000542.1-201ENST00000448473 371 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 snoU13.28-201ENST00000459235 104 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 RNU7-23P-201ENST00000459465 62 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.06□□□□□ -2.08
CDX2Q99626 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.06□□□□□ -2.08
CDX2Q99626 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.06□□□□□ -2.08
CDX2Q99626 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CDX2Q99626 AC147055.4-201ENST00000504399 745 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 AC020699.1-201ENST00000505161 445 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.06□□□□□ -2.08
CDX2Q99626 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.06□□□□□ -2.08
CDX2Q99626 AP003467.2-201ENST00000520175 319 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 AP002748.2-201ENST00000528671 348 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.06□□□□□ -2.08
CDX2Q99626 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.06□□□□□ -2.08
CDX2Q99626 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.06□□□□□ -2.08
CDX2Q99626 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.06□□□□□ -2.08
CDX2Q99626 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.06□□□□□ -2.08
CDX2Q99626 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.06□□□□□ -2.08
CDX2Q99626 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.06□□□□□ -2.08
CDX2Q99626 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.06□□□□□ -2.08
CDX2Q99626 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.06□□□□□ -2.08
CDX2Q99626 MIR4509-3-201ENST00000578671 94 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 MIR4509-2-201ENST00000583920 94 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.06□□□□□ -2.08
CDX2Q99626 AL596327.1-201ENST00000603629 213 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 APOOP1-201ENST00000604695 592 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 AL450336.1-201ENST00000605180 586 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 AC012360.2-201ENST00000609349 391 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 AC093838.1-201ENST00000613014 469 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 AC011890.2-201ENST00000613393 294 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 MIR4509-1-201ENST00000618224 94 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 AP002791.1-201ENST00000623291 381 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 AP000770.2-201ENST00000623694 100 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 ZNF271P-202ENST00000465539 1970 ntBASIC2.06□□□□□ -2.08
CDX2Q99626 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.05□□□□□ -2.08
CDX2Q99626 RNU6-289P-201ENST00000364093 107 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 RNU1-39P-201ENST00000383897 165 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 RN7SKP266-201ENST00000410232 287 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 PIGPP2-201ENST00000411569 458 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.05□□□□□ -2.08
CDX2Q99626 AL451054.2-201ENST00000420896 202 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
CDX2Q99626 AC008850.1-201ENST00000427546 362 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.05□□□□□ -2.08
CDX2Q99626 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.05□□□□□ -2.08
CDX2Q99626 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.05□□□□□ -2.08
CDX2Q99626 MTCYBP3-201ENST00000445588 1137 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 DUXAP8-207ENST00000456786 622 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 AC107626.1-201ENST00000471084 183 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 RPS27P26-201ENST00000494583 239 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 ATP5EP1-201ENST00000510257 156 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 RNU6-250P-201ENST00000516958 103 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.05□□□□□ -2.08
CDX2Q99626 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CDX2Q99626 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.05□□□□□ -2.08
CDX2Q99626 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.05□□□□□ -2.08
CDX2Q99626 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.05□□□□□ -2.08
CDX2Q99626 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.05□□□□□ -2.08
CDX2Q99626 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.05□□□□□ -2.08
CDX2Q99626 AC090888.1-201ENST00000561335 1141 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.05□□□□□ -2.08
CDX2Q99626 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.05□□□□□ -2.08
CDX2Q99626 MIR4658-201ENST00000584344 65 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.05□□□□□ -2.08
CDX2Q99626 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.05□□□□□ -2.08
CDX2Q99626 SNRPGP19-201ENST00000603826 189 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 AL357094.1-201ENST00000603845 844 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 AL592221.1-201ENST00000605266 382 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 uc_338.5-201ENST00000611839 155 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms