Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC016691.1-201ENST00000441321 413 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AP004217.1-201ENST00000480579 346 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 RPS27P26-201ENST00000494583 239 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AC092436.1-201ENST00000506450 503 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 RAC1P5-201ENST00000512182 576 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AC104136.1-201ENST00000512969 394 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 Y_RNA.693-201ENST00000516641 110 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 RNU6-1183P-201ENST00000517054 60 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 TRMT10BP1-201ENST00000519377 943 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 PARP1P2-201ENST00000556806 195 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AC107871.2-201ENST00000612894 502 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AC083809.1-201ENST00000615051 472 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 U4.5-201ENST00000617137 123 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AC068792.1-201ENST00000621354 417 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 CR392039.5-201ENST00000623201 510 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 MIR6733-201ENST00000635723 61 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AC099654.7-201ENST00000635788 2127 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 ASNSP3-201ENST00000451989 1306 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
NR1H4Q96RI1 AC006020.1-201ENST00000420179 1854 ntBASIC3.09□□□□□ -1.92
NR1H4Q96RI1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NR1H4Q96RI1 HSPA8P4-201ENST00000511877 1920 ntBASIC3.09□□□□□ -1.92
NR1H4Q96RI1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 RNU1-70P-201ENST00000362618 164 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 RPL17P50-201ENST00000396131 546 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 RPL32P23-201ENST00000397237 405 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 SNORD88.1-201ENST00000408684 91 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 UBE2V1P10-201ENST00000414685 269 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 MTCO1P21-201ENST00000416634 589 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 TOMM20P4-201ENST00000427861 435 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 RPS29P7-201ENST00000439662 171 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 FDX1P2-201ENST00000450769 375 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 BTF3P15-201ENST00000455606 336 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AC019235.1-201ENST00000503847 207 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AC098799.2-201ENST00000509466 868 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AC112206.3-201ENST00000514578 389 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 LRRC34P2-201ENST00000514850 553 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 RNU6-1178P-201ENST00000516674 107 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 RNU6-56P-201ENST00000516986 93 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 HIF1AP1-201ENST00000553642 175 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AL645944.1-201ENST00000603857 493 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AP001596.2-201ENST00000608410 312 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AC093788.1-201ENST00000609356 927 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AC091903.1-201ENST00000624322 454 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 RNA5SP196-201ENST00000625967 102 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AC027514.1-201ENST00000588561 1603 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.08□□□□□ -1.92
NR1H4Q96RI1 AP003122.5-201ENST00000527668 3766 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 RNA5SP119-201ENST00000362715 117 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 Y_RNA.372-201ENST00000365599 102 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 MIR578-201ENST00000384828 96 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 MIR34A-201ENST00000385130 110 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 RNU6-903P-201ENST00000391270 109 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 RNU2-49P-201ENST00000410666 184 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 Y_RNA.623-201ENST00000411128 95 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 RSL24D1P6-201ENST00000426934 401 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 SAR1AP4-201ENST00000429225 591 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 MYL8P-204ENST00000431574 518 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 GTF2IP20-201ENST00000431663 360 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 AC073415.1-201ENST00000449240 153 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms