Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 AL121769.1-201ENST00000469473 401 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 MTND1P3-201ENST00000484956 952 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 AC090096.1-201ENST00000489168 390 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 AC112204.1-201ENST00000502591 103 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS35Q96QK1 BTF3P12-201ENST00000519620 469 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.42□□□□□ -2.02
VPS35Q96QK1 AP001646.1-201ENST00000527936 915 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.42□□□□□ -2.02
VPS35Q96QK1 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS35Q96QK1 AC005261.5-201ENST00000596280 355 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 AC103710.2-201ENST00000609912 942 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 MIR6895-201ENST00000613497 78 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS35Q96QK1 AP002791.1-201ENST00000623291 381 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 FRG1KP-201ENST00000623592 341 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 AC091953.2-201ENST00000623979 160 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 AC006927.3-201ENST00000638789 384 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS35Q96QK1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
VPS35Q96QK1 AC010329.5-201ENST00000623497 2174 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS35Q96QK1 RNU6-188P-201ENST00000364207 107 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 SMIM11P1-201ENST00000369586 178 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 AC009963.1-201ENST00000417265 157 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 AC006366.1-201ENST00000422002 759 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 AC011233.1-201ENST00000422812 283 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 AC010099.3-201ENST00000423896 409 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 AC093106.2-201ENST00000428212 385 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS35Q96QK1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.41□□□□□ -2.02
VPS35Q96QK1 MTND5P2-201ENST00000442927 1142 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS35Q96QK1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS35Q96QK1 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 RNU6-953P-201ENST00000459154 107 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS35Q96QK1 RPL39P36-201ENST00000490784 156 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS35Q96QK1 NDUFB4P2-201ENST00000509515 391 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 AC107222.1-201ENST00000510899 637 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 SNORD19.2-201ENST00000516978 73 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 EEF1A1P37-201ENST00000522748 715 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS35Q96QK1 PRELID2P1-201ENST00000552837 301 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS35Q96QK1 AC027176.1-201ENST00000560204 514 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS35Q96QK1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS35Q96QK1 MTCYBP22-201ENST00000603788 447 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 AC103810.6-201ENST00000606708 136 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 MIR1291-201ENST00000627649 87 ntBASIC2.41□□□□□ -2.02
VPS35Q96QK1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.41□□□□□ -2.02
VPS35Q96QK1 MTND4P35-201ENST00000604257 1375 ntBASIC2.4□□□□□ -2.02
VPS35Q96QK1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS35Q96QK1 TAS2R15P-201ENST00000390674 928 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 FCF1P10-201ENST00000407590 479 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 RPS12P24-201ENST00000412619 387 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS35Q96QK1 HMGB3P12-201ENST00000438745 556 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS35Q96QK1 AL161651.1-201ENST00000440882 223 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.4□□□□□ -2.03
VPS35Q96QK1 MTND1P12-201ENST00000455231 147 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 AC133134.1-201ENST00000466800 359 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 GZMAP1-201ENST00000503054 631 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.4□□□□□ -2.03
VPS35Q96QK1 AF131216.2-201ENST00000512316 564 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 RNU6-143P-201ENST00000516942 93 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS35Q96QK1 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS35Q96QK1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.4□□□□□ -2.03
VPS35Q96QK1 AC009094.1-201ENST00000564443 426 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 MIR3167-201ENST00000579623 85 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 MIR3118-1-201ENST00000581787 76 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS35Q96QK1 BNIP3P9-201ENST00000603714 553 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 AC104763.2-201ENST00000604179 382 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 AC105129.3-201ENST00000605455 485 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 AC104010.1-201ENST00000616889 150 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 AC025034.2-201ENST00000623264 286 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 Z99571.1-201ENST00000636677 394 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 MTND5P42-201ENST00000637720 498 ntBASIC2.4□□□□□ -2.03
VPS35Q96QK1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
VPS35Q96QK1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
VPS35Q96QK1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VPS35Q96QK1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS35Q96QK1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VPS35Q96QK1 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS35Q96QK1 RNU5E-6P-201ENST00000365574 115 ntBASIC2.39□□□□□ -2.03
VPS35Q96QK1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS35Q96QK1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.39□□□□□ -2.03
VPS35Q96QK1 RNU6-443P-201ENST00000384780 107 ntBASIC2.39□□□□□ -2.03
VPS35Q96QK1 SNORD115.1-201ENST00000391109 76 ntBASIC2.39□□□□□ -2.03
VPS35Q96QK1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS35Q96QK1 RPS15AP12-201ENST00000419498 388 ntBASIC2.39□□□□□ -2.03
VPS35Q96QK1 SEPT2P1-201ENST00000419651 180 ntBASIC2.39□□□□□ -2.03
VPS35Q96QK1 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS35Q96QK1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms