Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 UBE2FP3-201ENST00000436366 524 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 AL161651.1-201ENST00000440882 223 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.28□□□□□ -2.04
RPRD1AQ96P16 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.28□□□□□ -2.04
RPRD1AQ96P16 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.28□□□□□ -2.04
RPRD1AQ96P16 RPL23AP41-201ENST00000484754 458 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 GZMAP1-201ENST00000503054 631 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.28□□□□□ -2.04
RPRD1AQ96P16 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.28□□□□□ -2.04
RPRD1AQ96P16 SNORD19.2-201ENST00000516978 73 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.28□□□□□ -2.04
RPRD1AQ96P16 AC010186.2-204ENST00000537668 439 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 SNRPGP18-201ENST00000553000 214 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 AC026464.5-201ENST00000562497 722 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 AL049838.1-201ENST00000563647 981 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 MIR1273D-201ENST00000577266 86 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 AL021997.1-201ENST00000605757 193 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 AL391813.2-201ENST00000609113 322 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.28□□□□□ -2.04
RPRD1AQ96P16 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
RPRD1AQ96P16 AL607023.1-201ENST00000620045 248 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RPRD1AQ96P16 ZNF876P-202ENST00000398732 1485 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 AC104454.1-201ENST00000421341 1401 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 U8.2-201ENST00000363156 134 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 RNU6-188P-201ENST00000364207 107 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 MIR513B-201ENST00000385136 84 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RPRD1AQ96P16 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 RN7SKP223-201ENST00000410582 62 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.27□□□□□ -2.05
RPRD1AQ96P16 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.27□□□□□ -2.05
RPRD1AQ96P16 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.27□□□□□ -2.05
RPRD1AQ96P16 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.27□□□□□ -2.05
RPRD1AQ96P16 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.27□□□□□ -2.05
RPRD1AQ96P16 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RPRD1AQ96P16 HMGN2P38-201ENST00000423806 265 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.27□□□□□ -2.05
RPRD1AQ96P16 CR769776.1-201ENST00000441254 787 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 OR6C5P-201ENST00000452388 923 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 DYNLL1P5-201ENST00000467158 270 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.27□□□□□ -2.05
RPRD1AQ96P16 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.27□□□□□ -2.05
RPRD1AQ96P16 AP005902.1-201ENST00000521358 186 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 AC087241.2-201ENST00000535801 324 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.27□□□□□ -2.05
RPRD1AQ96P16 AL121821.2-201ENST00000556081 394 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 AC027807.1-201ENST00000559921 996 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 AGGF1P5-201ENST00000567900 919 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 AL356432.3-201ENST00000568952 465 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 MIR3167-201ENST00000579623 85 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 MIR4307-201ENST00000582802 84 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 BNIP3P40-201ENST00000596017 556 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.27□□□□□ -2.05
RPRD1AQ96P16 AL358072.1-201ENST00000604156 575 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 SNORD14A-201ENST00000606526 91 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 AC108747.1-201ENST00000609508 535 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 AC009831.4-201ENST00000620744 325 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 AP002791.1-201ENST00000623291 381 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 AL078595.3-201ENST00000623815 1166 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 AC012640.5-201ENST00000623897 319 ntBASIC2.27□□□□□ -2.05
RPRD1AQ96P16 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.27□□□□□ -2.05
RPRD1AQ96P16 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.27□□□□□ -2.05
RPRD1AQ96P16 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RPRD1AQ96P16 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
RPRD1AQ96P16 MTND4P35-201ENST00000604257 1375 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 Y_RNA.46-201ENST00000362695 102 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 Y_RNA.302-201ENST00000364997 102 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 SNORA70B-201ENST00000384210 135 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 AL355497.1-201ENST00000406262 551 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 RPL30P4-201ENST00000429309 333 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 MTND1P20-201ENST00000430341 950 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 HMGB1P27-201ENST00000431429 603 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 AC090255.1-201ENST00000495779 349 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 AC026801.1-201ENST00000497178 464 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 RNA5SP200-201ENST00000516360 103 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 SCARNA3-201ENST00000517097 143 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 MTATP6P15-201ENST00000527233 835 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 AC078814.3-201ENST00000553036 491 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 ROCK1P1-201ENST00000573767 549 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 MIR5571-201ENST00000577998 113 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms