Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 PRR13P7-201ENST00000605538 430 ntBASIC3.35□□□□□ -1.87
ZNF48Q96MX3 AC006157.1-201ENST00000611750 366 ntBASIC3.35□□□□□ -1.87
ZNF48Q96MX3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.35□□□□□ -1.87
ZNF48Q96MX3 AC091925.2-201ENST00000625059 256 ntBASIC3.35□□□□□ -1.87
ZNF48Q96MX3 AL732372.2-225ENST00000642124 456 ntBASIC3.35□□□□□ -1.87
ZNF48Q96MX3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
ZNF48Q96MX3 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 AC116667.1-201ENST00000604855 2072 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF48Q96MX3 AL672296.1-201ENST00000427780 2158 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 Y_RNA.153-201ENST00000363615 91 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 RNU6-1284P-201ENST00000363701 100 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 Y_RNA.404-201ENST00000383978 102 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 RNU6-432P-201ENST00000384196 109 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 Y_RNA.455-201ENST00000384230 98 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 SNORD51-201ENST00000384320 80 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 EI24P2-201ENST00000397776 1076 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF48Q96MX3 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF48Q96MX3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.34□□□□□ -1.87
ZNF48Q96MX3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.34□□□□□ -1.87
ZNF48Q96MX3 AC093151.1-201ENST00000427711 313 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 CALM2P2-201ENST00000428512 440 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF48Q96MX3 RPL35AP22-201ENST00000436855 335 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 GSTA11P-201ENST00000452866 669 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 RPS27AP1-201ENST00000475545 471 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 AC006517.1-201ENST00000480485 328 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 AC110794.1-201ENST00000505816 425 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 MRPS35P2-201ENST00000508242 191 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF48Q96MX3 AC026782.1-201ENST00000512952 449 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 IGHV3-76-201ENST00000522465 295 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF48Q96MX3 RANP3-201ENST00000530970 276 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF48Q96MX3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.34□□□□□ -1.87
ZNF48Q96MX3 MYL12BP1-201ENST00000569826 507 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 AC113195.1-201ENST00000579952 141 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 MIR5692C1-201ENST00000585309 91 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 AC012669.1-201ENST00000603209 283 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 AL606490.9-201ENST00000603331 271 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 AC009229.3-201ENST00000608056 282 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 MIR6128-201ENST00000615528 109 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 MIR6500-201ENST00000622700 86 ntBASIC3.34□□□□□ -1.87
ZNF48Q96MX3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF48Q96MX3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF48Q96MX3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
ZNF48Q96MX3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF48Q96MX3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 RNA5SP322-201ENST00000363617 119 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 RNU6-1074P-201ENST00000383995 104 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 SNORA16.2-201ENST00000390991 127 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 Y_RNA.645-201ENST00000391229 102 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 AL109755.1-201ENST00000401791 649 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 AC079780.1-201ENST00000428259 207 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 AL445584.1-201ENST00000431451 330 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 Y_RNA.670-201ENST00000516255 105 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 RNU6-1069P-201ENST00000516612 133 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 RNU6-635P-201ENST00000516651 102 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 RNA5SP143-201ENST00000516936 115 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 Y_RNA.708-201ENST00000516950 96 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 DEFB108D-201ENST00000527787 222 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 AC023442.1-201ENST00000531247 422 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 SETP7-201ENST00000552169 453 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 MIR4444-1-201ENST00000581696 74 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 MIR4444-2-201ENST00000584390 74 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 AC009570.1-201ENST00000609599 745 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 U2.17-201ENST00000611454 95 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 PISRT1.1-201ENST00000616930 107 ntBASIC3.33□□□□□ -1.88
ZNF48Q96MX3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
ZNF48Q96MX3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms