Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RNU2-25P-201ENST00000411041 191 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 RN7SKP263-201ENST00000411194 309 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 AL139247.1-201ENST00000422768 325 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 RSL24D1P6-201ENST00000426934 401 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 AC093151.1-201ENST00000427711 313 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.94□□□□□ -1.94
CMTM3Q96MX0 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.94□□□□□ -1.94
CMTM3Q96MX0 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.94□□□□□ -1.94
CMTM3Q96MX0 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.94□□□□□ -1.94
CMTM3Q96MX0 AC233279.1-201ENST00000455300 423 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 BTF3P15-201ENST00000455606 336 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 AL163973.1-201ENST00000484753 577 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.94□□□□□ -1.94
CMTM3Q96MX0 SEM1P1-201ENST00000506694 209 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 RNU6-581P-201ENST00000516214 105 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 SCARNA20.6-201ENST00000517251 106 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 AC104383.1-201ENST00000530297 370 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 OR8R1P-201ENST00000543943 764 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.94□□□□□ -1.94
CMTM3Q96MX0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.94□□□□□ -1.94
CMTM3Q96MX0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.94□□□□□ -1.94
CMTM3Q96MX0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.94□□□□□ -1.94
CMTM3Q96MX0 AL354950.2-201ENST00000617939 290 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 AC068792.1-201ENST00000621354 417 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.94□□□□□ -1.94
CMTM3Q96MX0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.94□□□□□ -1.94
CMTM3Q96MX0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CMTM3Q96MX0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
CMTM3Q96MX0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CMTM3Q96MX0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CMTM3Q96MX0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
CMTM3Q96MX0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CMTM3Q96MX0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.93□□□□□ -1.94
CMTM3Q96MX0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CMTM3Q96MX0 AC004944.1-201ENST00000517807 3059 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 AC006020.1-201ENST00000420179 1854 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 MTND5P19-201ENST00000424872 1794 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CMTM3Q96MX0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CMTM3Q96MX0 RNA5SP515-201ENST00000364570 118 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 RNU6-898P-201ENST00000365627 104 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 AL512633.1-201ENST00000399931 655 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 FO393413.1-201ENST00000402892 195 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 AL592148.1-201ENST00000413568 445 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 Z99755.1-201ENST00000414048 380 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 UBE2V1P10-201ENST00000414685 269 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 AL353621.1-201ENST00000418219 243 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.93□□□□□ -1.94
CMTM3Q96MX0 AL606489.2-201ENST00000433886 234 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 AC073063.1-201ENST00000434352 607 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 OSTCP8-201ENST00000445117 448 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 UBBP3-201ENST00000445497 241 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.93□□□□□ -1.94
CMTM3Q96MX0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.93□□□□□ -1.94
CMTM3Q96MX0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.93□□□□□ -1.94
CMTM3Q96MX0 HMGB1P30-201ENST00000492455 606 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.93□□□□□ -1.94
CMTM3Q96MX0 LRRC34P2-201ENST00000514850 553 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.93□□□□□ -1.94
CMTM3Q96MX0 GLYCAM1-201ENST00000546596 285 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 AC092325.1-201ENST00000566449 554 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 EIF1P4-201ENST00000572664 335 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.93□□□□□ -1.94
CMTM3Q96MX0 AL391813.1-201ENST00000603098 260 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 AC091152.3-201ENST00000604227 325 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 AP001596.2-201ENST00000608410 312 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
CMTM3Q96MX0 FP236240.3-201ENST00000623061 327 ntBASIC2.93□□□□□ -1.94
CMTM3Q96MX0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
CMTM3Q96MX0 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.93□□□□□ -1.94
CMTM3Q96MX0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.93□□□□□ -1.94
CMTM3Q96MX0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 AC026241.1-201ENST00000517873 2142 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 AC126755.2-208ENST00000327792 462 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 AC138969.1-213ENST00000331436 462 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 RNU6-552P-201ENST00000362869 119 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 RNU6-1085P-201ENST00000363576 107 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 RNU6-1322P-201ENST00000364309 107 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 SNORD14B-201ENST00000364533 90 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 RNU6-715P-201ENST00000365204 103 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 RNU6-1280P-201ENST00000365211 107 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 Y_RNA.381-201ENST00000365666 102 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 RNU6-45P-201ENST00000384471 107 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 CALM2P3-201ENST00000400429 449 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 RN7SKP58-201ENST00000411010 305 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 RAB9AP3-201ENST00000412737 573 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 MTCYBP8-201ENST00000422855 651 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 MTND3P21-201ENST00000433774 331 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 AC244505.4-201ENST00000434905 287 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 CST9LP2-201ENST00000437612 320 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 SSXP5-201ENST00000443473 287 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 AC073415.1-201ENST00000449240 153 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 RAB9AP1-201ENST00000449393 573 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms