Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC093809.1-201ENST00000509155 340 ntBASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 AC093281.2-201ENST00000510153 597 ntBASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 MTND2P7-201ENST00000521337 640 ntBASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 UBTFL10-201ENST00000528532 562 ntBASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 AC026271.5-201ENST00000577873 130 ntBASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 AC009314.1-201ENST00000603871 304 ntBASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 AC007621.1-201ENST00000604544 437 ntBASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 AL592221.1-201ENST00000605266 382 ntBASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 AP001002.2-201ENST00000625137 386 ntBASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
PKNOX2Q96KN3 RNU6-7-201ENST00000364784 107 ntBASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 RNU6-8-201ENST00000365467 107 ntBASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 SNORA67.4-201ENST00000384688 142 ntBASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 RNU6-1242P-201ENST00000391052 103 ntBASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 CISD1P1-201ENST00000393907 327 ntBASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 EIF4EP2-201ENST00000422816 654 ntBASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 USP9YP24-201ENST00000434374 697 ntBASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 USP9YP17-201ENST00000444617 696 ntBASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 AC008481.1-201ENST00000463278 396 ntBASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 AC104090.1-201ENST00000506341 1171 ntBASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 AL033523.1-201ENST00000605153 153 ntBASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 AC099842.1-201ENST00000619919 596 ntBASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 AP000676.3-201ENST00000623299 569 ntBASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.24□□□□□ -2.05
PKNOX2Q96KN3 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 MTND5P33-201ENST00000571250 1450 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 RNU6-636P-201ENST00000384598 107 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 MIR483-201ENST00000385070 76 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 USP9YP26-201ENST00000421008 661 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 NANOGP5-201ENST00000424456 877 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 AC025750.2-201ENST00000442609 450 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 PTENP1-201ENST00000447117 1215 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 AC013267.1-201ENST00000458227 267 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 MTND3P3-201ENST00000505004 126 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 AC234781.5-201ENST00000508429 271 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 RNU6-927P-201ENST00000516199 100 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 AL133153.1-201ENST00000557756 303 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 RNU6-88P-201ENST00000606801 100 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 OR2AS2P-201ENST00000606902 342 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 AL391834.2-201ENST00000609982 546 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 AC135507.2-201ENST00000612443 309 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 AL136981.2-201ENST00000617319 734 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.23□□□□□ -2.05
PKNOX2Q96KN3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 MIR518A2-201ENST00000384966 87 ntBASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 AL359704.1-201ENST00000411586 781 ntBASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 ELOCP9-201ENST00000418624 239 ntBASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 AL117351.1-201ENST00000438864 766 ntBASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 MTND3P1-201ENST00000441336 220 ntBASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 AC020550.1-201ENST00000447385 163 ntBASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 HSPE1P24-201ENST00000450782 238 ntBASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 RPS3AP14-201ENST00000483907 780 ntBASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 MTND5P13-201ENST00000513046 1079 ntBASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 MTATP6P9-201ENST00000515039 680 ntBASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 RNU6-390P-201ENST00000516259 103 ntBASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 RNA5SP290-201ENST00000517133 127 ntBASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 MIR4319-201ENST00000577285 85 ntBASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 RPP40P2-201ENST00000603596 712 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms