Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.2□□□□□ -1.9
RTP4Q96DX8 AC010285.1-201ENST00000470580 392 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 RPL31P13-201ENST00000484151 370 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 AC103851.1-201ENST00000506833 274 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 CCDC34P1-201ENST00000507441 517 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 Y_RNA.665-201ENST00000516177 98 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 RNU6-1092P-201ENST00000516955 87 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 AC109635.4-202ENST00000531666 412 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 AP004242.1-201ENST00000533701 349 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.2□□□□□ -1.9
RTP4Q96DX8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.2□□□□□ -1.9
RTP4Q96DX8 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.2□□□□□ -1.9
RTP4Q96DX8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.2□□□□□ -1.9
RTP4Q96DX8 MIR4424-201ENST00000585257 86 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.2□□□□□ -1.9
RTP4Q96DX8 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.2□□□□□ -1.9
RTP4Q96DX8 AC107294.3-201ENST00000609211 526 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 AC007742.2-201ENST00000618226 398 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 AL353748.2-201ENST00000622148 471 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 AC025034.2-201ENST00000623264 286 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RTP4Q96DX8 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTP4Q96DX8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RTP4Q96DX8 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTP4Q96DX8 AP001350.1-201ENST00000601906 1524 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
RTP4Q96DX8 MTND5P17-201ENST00000418405 1603 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.19□□□□□ -1.9
RTP4Q96DX8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.19□□□□□ -1.9
RTP4Q96DX8 Y_RNA.166-201ENST00000363730 102 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 Y_RNA.231-201ENST00000364358 102 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 RNU6-522P-201ENST00000364497 107 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 RNU4-76P-201ENST00000364509 141 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 RNA5SP189-201ENST00000364920 115 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 RNU4-66P-201ENST00000365199 138 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 SNORD115-7-201ENST00000365306 82 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 RNU6-1181P-201ENST00000384191 106 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 Y_RNA.576-201ENST00000384781 102 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 AL359634.1-202ENST00000404721 284 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 RNU6-193P-201ENST00000410977 107 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 AC245054.2-201ENST00000415639 319 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 MTCO3P46-201ENST00000425787 232 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 AC090774.1-201ENST00000435925 246 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.19□□□□□ -1.9
RTP4Q96DX8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.19□□□□□ -1.9
RTP4Q96DX8 MTND1P18-201ENST00000448191 573 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 AL590639.1-201ENST00000456484 337 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 RNU7-180P-201ENST00000459240 63 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 SNORA59A-201ENST00000459326 152 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 AC008481.1-201ENST00000463278 396 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 AC109925.1-201ENST00000478069 331 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 RPL21P99-201ENST00000480369 423 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 MTCO3P9-201ENST00000506989 781 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.19□□□□□ -1.9
RTP4Q96DX8 RBBP4P6-201ENST00000508098 202 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 FGF7P4-201ENST00000509595 295 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.19□□□□□ -1.9
RTP4Q96DX8 RNU4-49P-201ENST00000516080 140 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 RNA5SP503-201ENST00000517047 117 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 RNA5SP380-201ENST00000517190 98 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 AC105029.1-201ENST00000520250 669 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RTP4Q96DX8 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.19□□□□□ -1.9
RTP4Q96DX8 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.19□□□□□ -1.9
RTP4Q96DX8 AC044792.1-201ENST00000593294 196 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 VN1R80P-201ENST00000597126 338 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.19□□□□□ -1.9
RTP4Q96DX8 AL603758.1-201ENST00000618654 241 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 AL713922.2-201ENST00000619384 716 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.19□□□□□ -1.9
RTP4Q96DX8 AL133216.2-202ENST00000634512 349 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 AL353743.1-202ENST00000431724 1695 ntBASIC3.19□□□□□ -1.9
RTP4Q96DX8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
RTP4Q96DX8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RTP4Q96DX8 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RTP4Q96DX8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RTP4Q96DX8 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RTP4Q96DX8 AC073343.1-201ENST00000328239 651 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 AC073325.2-201ENST00000339545 159 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 RNU4-79P-201ENST00000362764 141 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 RNU6-179P-201ENST00000363350 107 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 Y_RNA.394-201ENST00000383942 103 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 RNU6-831P-201ENST00000384548 107 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 MIR607-201ENST00000385241 96 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.18□□□□□ -1.9
RTP4Q96DX8 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.18□□□□□ -1.9
RTP4Q96DX8 ERLEC1P1-201ENST00000433806 578 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.18□□□□□ -1.9
RTP4Q96DX8 IFNA20P-201ENST00000436840 528 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 AC004866.2-201ENST00000438285 481 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 MTCO3P45-201ENST00000443036 613 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 AC020550.1-201ENST00000447385 163 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.18□□□□□ -1.9
RTP4Q96DX8 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.18□□□□□ -1.9
RTP4Q96DX8 RN7SKP43-201ENST00000516173 320 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 RNU6-277P-201ENST00000516272 106 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms