Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SMARCE1Q969G3 RNU6-179P-201ENST00000363350 107 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 SNORA38.1-201ENST00000364172 131 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 SNORA62.1-201ENST00000364287 154 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 SNORA4.3-201ENST00000365564 137 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.2□□□□□ -1.9
SMARCE1Q969G3 RPL7P10-201ENST00000417407 739 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.2□□□□□ -1.9
SMARCE1Q969G3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCE1Q969G3 RPL36AP53-201ENST00000432891 316 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.2□□□□□ -1.9
SMARCE1Q969G3 RPS29P20-201ENST00000489592 171 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCE1Q969G3 OR5AL2P-201ENST00000532185 920 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AC245505.1-201ENST00000556398 224 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 MIR4444-1-201ENST00000581696 74 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 MIR4444-2-201ENST00000584390 74 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AC008521.1-201ENST00000587471 187 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 BNIP3P9-201ENST00000603714 553 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 MTND4LP5-201ENST00000605152 292 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AC007684.1-201ENST00000609671 477 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AC087241.4-201ENST00000612441 480 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AL157786.1-207ENST00000627771 695 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AL512643.1-201ENST00000635735 524 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMARCE1Q969G3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AC103710.2-202ENST00000641454 2853 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AC010680.1-201ENST00000590024 3590 ntBASIC3.2□□□□□ -1.9
SMARCE1Q969G3 AL161431.1-201ENST00000618966 4205 ntBASIC3.19□□□□□ -1.9
SMARCE1Q969G3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMARCE1Q969G3 RNU6-884P-201ENST00000363889 107 ntBASIC3.19□□□□□ -1.9
SMARCE1Q969G3 MIR454-201ENST00000390180 115 ntBASIC3.19□□□□□ -1.9
SMARCE1Q969G3 RNU4-55P-201ENST00000410731 137 ntBASIC3.19□□□□□ -1.9
SMARCE1Q969G3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.19□□□□□ -1.9
SMARCE1Q969G3 MTATP6P18-201ENST00000417994 673 ntBASIC3.19□□□□□ -1.9
SMARCE1Q969G3 AL353193.1-201ENST00000421444 268 ntBASIC3.19□□□□□ -1.9
SMARCE1Q969G3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SMARCE1Q969G3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.19□□□□□ -1.9
SMARCE1Q969G3 AC002486.1-201ENST00000435098 391 ntBASIC3.19□□□□□ -1.9
SMARCE1Q969G3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.19□□□□□ -1.9
SMARCE1Q969G3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.19□□□□□ -1.9
SMARCE1Q969G3 AC104472.2-201ENST00000469035 601 ntBASIC3.19□□□□□ -1.9
SMARCE1Q969G3 RPL9P6-201ENST00000492764 598 ntBASIC3.19□□□□□ -1.9
SMARCE1Q969G3 AC109927.2-201ENST00000506416 303 ntBASIC3.19□□□□□ -1.9
SMARCE1Q969G3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.19□□□□□ -1.9
SMARCE1Q969G3 AL359212.1-201ENST00000556608 614 ntBASIC3.19□□□□□ -1.9
SMARCE1Q969G3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.19□□□□□ -1.9
SMARCE1Q969G3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.19□□□□□ -1.9
SMARCE1Q969G3 MIR4429-201ENST00000580105 73 ntBASIC3.19□□□□□ -1.9
SMARCE1Q969G3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.19□□□□□ -1.9
SMARCE1Q969G3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.19□□□□□ -1.9
SMARCE1Q969G3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMARCE1Q969G3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SMARCE1Q969G3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.18□□□□□ -1.9
SMARCE1Q969G3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AC233263.6-201ENST00000631132 1963 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AL359693.1-201ENST00000614959 2407 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 Y_RNA.1-201ENST00000352915 104 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 SNORD115-7-201ENST00000365306 82 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 Y_RNA.576-201ENST00000384781 102 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 MIR23B-201ENST00000384832 97 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 RNU2-68P-201ENST00000410878 191 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AL031779.1-201ENST00000415663 330 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.18□□□□□ -1.9
SMARCE1Q969G3 SKA2P1-201ENST00000425592 390 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.18□□□□□ -1.9
SMARCE1Q969G3 CYCSP32-201ENST00000440548 321 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AL590639.1-201ENST00000456484 337 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AL162395.1-201ENST00000457882 422 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 RPS27AP9-201ENST00000477681 438 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AC107401.1-201ENST00000503426 685 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AC098591.2-201ENST00000510152 315 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AC010493.1-201ENST00000513479 292 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.18□□□□□ -1.9
SMARCE1Q969G3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AP003122.3-201ENST00000526316 255 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AC084851.1-201ENST00000529105 249 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 OR4R1P-201ENST00000529879 463 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 HPRT1P3-201ENST00000539521 576 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 ADI1P3-201ENST00000549509 470 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.18□□□□□ -1.9
SMARCE1Q969G3 H3F3AP1-201ENST00000559984 334 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 MIR4775-201ENST00000581168 75 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.18□□□□□ -1.9
SMARCE1Q969G3 YPEL5P2-201ENST00000605553 359 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AL158209.2-201ENST00000619266 216 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AC011155.2-201ENST00000623202 216 ntBASIC3.18□□□□□ -1.9
SMARCE1Q969G3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms