Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.66□□□□□ -2.14
LMX1AQ8TE12 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.66□□□□□ -2.14
LMX1AQ8TE12 AL359212.1-201ENST00000556608 614 ntBASIC1.66□□□□□ -2.14
LMX1AQ8TE12 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.66□□□□□ -2.14
LMX1AQ8TE12 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.66□□□□□ -2.14
LMX1AQ8TE12 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.66□□□□□ -2.14
LMX1AQ8TE12 AL450336.1-201ENST00000605180 586 ntBASIC1.66□□□□□ -2.14
LMX1AQ8TE12 AL589743.7-201ENST00000612637 233 ntBASIC1.66□□□□□ -2.14
LMX1AQ8TE12 AC006386.1-201ENST00000619436 415 ntBASIC1.66□□□□□ -2.14
LMX1AQ8TE12 AC068057.2-201ENST00000624047 895 ntBASIC1.66□□□□□ -2.14
LMX1AQ8TE12 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.66□□□□□ -2.14
LMX1AQ8TE12 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.66□□□□□ -2.14
LMX1AQ8TE12 AL359851.1-201ENST00000569460 4997 ntBASIC1.66□□□□□ -2.14
LMX1AQ8TE12 WWP1P1-201ENST00000466609 2769 ntBASIC1.65□□□□□ -2.14
LMX1AQ8TE12 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
LMX1AQ8TE12 RNU6-223P-201ENST00000362830 107 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 RNU6-744P-201ENST00000365557 107 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 RNU6-1316P-201ENST00000384242 108 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AL356421.1-201ENST00000403255 413 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 RNU6-516P-201ENST00000411381 104 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.65□□□□□ -2.15
LMX1AQ8TE12 MTATP6P20-201ENST00000414147 562 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 USP9YP13-201ENST00000417797 480 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 BTF3P4-201ENST00000418852 495 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AL353729.1-201ENST00000425044 720 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.65□□□□□ -2.15
LMX1AQ8TE12 RPL35AP22-201ENST00000436855 335 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC016691.1-201ENST00000441321 413 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 MTCO1P53-201ENST00000441633 699 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC080013.2-201ENST00000460866 323 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AL163540.1-201ENST00000485382 386 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC098591.2-201ENST00000510152 315 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC024589.1-201ENST00000512207 263 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 RNU6-150P-201ENST00000516237 95 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 MIR514B-201ENST00000516774 80 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC023538.1-201ENST00000534576 736 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AL138976.2-201ENST00000563989 694 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.65□□□□□ -2.15
LMX1AQ8TE12 MIR3618-201ENST00000580330 88 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 MIR4303-201ENST00000581299 66 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 UBE2L4-201ENST00000587688 464 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.65□□□□□ -2.15
LMX1AQ8TE12 BNIP3P31-201ENST00000604515 566 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC025588.2-201ENST00000604851 466 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AL139344.1-201ENST00000605228 195 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC007349.4-201ENST00000608114 532 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC239868.4-201ENST00000608318 671 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 PART1_2.1-201ENST00000612397 250 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC107075.1-201ENST00000613695 314 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AL161423.1-201ENST00000613700 262 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 TUG1_2.1-201ENST00000614234 87 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC109809.1-201ENST00000619665 545 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AL158801.5-201ENST00000623123 465 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC004808.1-201ENST00000627671 721 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 U2.21-201ENST00000637295 81 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 CENPCP1-201ENST00000533085 2578 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 AC006026.1-201ENST00000444025 1803 ntBASIC1.65□□□□□ -2.15
LMX1AQ8TE12 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
LMX1AQ8TE12 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LMX1AQ8TE12 SNORD116-12-201ENST00000384468 92 ntBASIC1.64□□□□□ -2.15
LMX1AQ8TE12 AL356379.1-201ENST00000414105 126 ntBASIC1.64□□□□□ -2.15
LMX1AQ8TE12 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.64□□□□□ -2.15
LMX1AQ8TE12 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.64□□□□□ -2.15
LMX1AQ8TE12 USP9YP26-201ENST00000421008 661 ntBASIC1.64□□□□□ -2.15
LMX1AQ8TE12 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.64□□□□□ -2.15
LMX1AQ8TE12 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.64□□□□□ -2.15
LMX1AQ8TE12 EEF1E1P1-201ENST00000446998 430 ntBASIC1.64□□□□□ -2.15
LMX1AQ8TE12 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.64□□□□□ -2.15
LMX1AQ8TE12 MTCO1P27-201ENST00000448269 226 ntBASIC1.64□□□□□ -2.15
LMX1AQ8TE12 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.64□□□□□ -2.15
LMX1AQ8TE12 RPL26P9-201ENST00000457466 433 ntBASIC1.64□□□□□ -2.15
LMX1AQ8TE12 AC105252.1-201ENST00000503089 286 ntBASIC1.64□□□□□ -2.15
LMX1AQ8TE12 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.64□□□□□ -2.15
LMX1AQ8TE12 HMGN1P28-201ENST00000521340 364 ntBASIC1.64□□□□□ -2.15
LMX1AQ8TE12 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.64□□□□□ -2.15
LMX1AQ8TE12 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.64□□□□□ -2.15
LMX1AQ8TE12 AC010186.2-204ENST00000537668 439 ntBASIC1.64□□□□□ -2.15
LMX1AQ8TE12 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
LMX1AQ8TE12 MIR3935-201ENST00000583472 104 ntBASIC1.64□□□□□ -2.15
LMX1AQ8TE12 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.64□□□□□ -2.15
LMX1AQ8TE12 AC025165.5-201ENST00000602802 578 ntBASIC1.64□□□□□ -2.15
LMX1AQ8TE12 AC090186.1-201ENST00000605991 572 ntBASIC1.64□□□□□ -2.15
LMX1AQ8TE12 AC010133.1-201ENST00000615809 842 ntBASIC1.64□□□□□ -2.15
LMX1AQ8TE12 AL138960.2-201ENST00000625145 535 ntBASIC1.64□□□□□ -2.15
LMX1AQ8TE12 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.63□□□□□ -2.15
LMX1AQ8TE12 MIR17-201ENST00000385012 84 ntBASIC1.63□□□□□ -2.15
LMX1AQ8TE12 TXNP7-201ENST00000406296 293 ntBASIC1.63□□□□□ -2.15
LMX1AQ8TE12 RNA5SP489-201ENST00000410986 109 ntBASIC1.63□□□□□ -2.15
LMX1AQ8TE12 BPY2DP-201ENST00000422208 265 ntBASIC1.63□□□□□ -2.15
LMX1AQ8TE12 EIF4EP4-201ENST00000424916 578 ntBASIC1.63□□□□□ -2.15
LMX1AQ8TE12 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.63□□□□□ -2.15
LMX1AQ8TE12 UBE2FP3-201ENST00000436366 524 ntBASIC1.63□□□□□ -2.15
LMX1AQ8TE12 AC098831.1-201ENST00000440661 216 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms