Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 HSPE1P19-201ENST00000603327 295 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 AL078605.1-201ENST00000603529 500 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 RNU6-1331P-201ENST00000363658 106 ntBASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 UBE2D3P2-201ENST00000424409 445 ntBASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 AL365496.1-201ENST00000426885 215 ntBASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 AL031663.1-201ENST00000437445 219 ntBASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 MIR924-201ENST00000638017 53 ntBASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 RPS15AP40-201ENST00000419621 391 ntBASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 UBE2V2P3-201ENST00000433562 437 ntBASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 AL713998.2-201ENST00000604538 1198 ntBASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 AP001485.1-201ENST00000604799 199 ntBASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 RNA5SP511-201ENST00000410487 115 ntBASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 AC103851.1-201ENST00000506833 274 ntBASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 RNU6-362P-201ENST00000516736 90 ntBASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 RPL37P10-201ENST00000412884 288 ntBASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 TOMM22P2-201ENST00000430735 237 ntBASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 AC067863.3-201ENST00000624172 122 ntBASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 OR4G3P-201ENST00000633500 913 ntBASIC0.49□□□□□ -2.33
ALMS1Q8TCU4 SNRPEP3-201ENST00000338402 276 ntBASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 MRPL35P3-201ENST00000421557 364 ntBASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 AC117454.1-201ENST00000491120 168 ntBASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 AC136932.1-201ENST00000574771 208 ntBASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 ELL2P3-201ENST00000457883 1602 ntBASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 MIR320B1-201ENST00000390209 79 ntBASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 AC067942.3-201ENST00000512025 362 ntBASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 AC107954.1-201ENST00000565906 727 ntBASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 AC103710.4-201ENST00000609301 899 ntBASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 AL021879.1-201ENST00000611756 288 ntBASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 AC015726.3-201ENST00000624501 418 ntBASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 MIR30A-201ENST00000385092 71 ntBASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 AC008379.1-201ENST00000463655 464 ntBASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
ALMS1Q8TCU4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 RNU6-16P-201ENST00000384385 107 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 USP9YP35-201ENST00000435696 412 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 HMGN1P30-201ENST00000589286 268 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 AC087045.1-201ENST00000605856 382 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 HSBP1P2-201ENST00000299671 229 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 AL645638.1-201ENST00000440519 361 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 ARPC3P5-201ENST00000448802 534 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 AC098862.1-201ENST00000504991 413 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 MTND2P26-201ENST00000528255 1029 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 AC093510.2-201ENST00000562820 896 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 MIR7157-201ENST00000635801 60 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 TPTE2P4-201ENST00000258589 1605 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 MIR329-2-201ENST00000385029 84 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 OR52A4P-202ENST00000481634 799 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 MIR892C-201ENST00000516410 77 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 RNU4-77P-201ENST00000516692 156 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 MIR3126-201ENST00000577443 74 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 AC022387.2-201ENST00000604050 448 ntBASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.47□□□□□ -2.33
ALMS1Q8TCU4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 MIR508-201ENST00000384857 115 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 RNA5SP212-201ENST00000391223 107 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 AC096920.1-201ENST00000423991 241 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 RNA5SP285-201ENST00000516619 119 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 AC068787.1-201ENST00000623908 691 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 RNU6-733P-201ENST00000410759 104 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 MTND2P9-201ENST00000422293 931 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 TRBV8-1-201ENST00000481590 279 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 MTCYBP16-201ENST00000509187 1129 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 AC104997.1-201ENST00000519761 717 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 AL133241.1-201ENST00000556832 487 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 AC146944.4-201ENST00000602697 718 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 AL391516.1-201ENST00000554380 2449 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 Y_RNA.412-201ENST00000384001 104 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms