Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 AL390237.1-201ENST00000404226 1415 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 Y_RNA.51-201ENST00000362725 102 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 Y_RNA.359-201ENST00000365498 102 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 RNU5E-6P-201ENST00000365574 115 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 SNORA20.2-201ENST00000383922 131 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 RNU6-39P-201ENST00000384344 107 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 RNA5SP210-201ENST00000391034 120 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AL122016.1-201ENST00000403365 367 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 RNU6-248P-201ENST00000410720 107 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 RNU2-68P-201ENST00000410878 191 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AL592045.1-201ENST00000429867 352 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AC009961.2-201ENST00000435771 251 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AC073614.1-201ENST00000438690 650 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AL031667.1-201ENST00000440222 725 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AC104389.3-201ENST00000445629 235 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 DPPA3P1-201ENST00000448050 469 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AL139109.1-201ENST00000455491 297 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AL122001.1-201ENST00000457027 370 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 MTCO2P29-201ENST00000465212 189 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 RPS27AP10-201ENST00000496103 208 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 ARL2BPP4-201ENST00000506854 471 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 MTND4P2-201ENST00000507767 1203 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 SNORA74D-201ENST00000516404 141 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 RNU1-103P-201ENST00000516502 125 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 RNU7-51P-201ENST00000516560 62 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 Vault.3-201ENST00000516676 95 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 RNU6-1092P-201ENST00000516955 87 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 RNU6-1220P-201ENST00000517126 108 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AC109329.2-201ENST00000519658 482 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AC022616.3-201ENST00000523940 148 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AC011471.1-201ENST00000585766 187 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AL356280.1-201ENST00000603614 379 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AL670379.6-201ENST00000603753 252 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AL670379.11-201ENST00000604059 253 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AC008162.1-201ENST00000604718 254 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AL670379.1-201ENST00000604752 252 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AL670379.5-201ENST00000605253 252 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AL670379.12-201ENST00000605291 253 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AL670379.8-201ENST00000605353 252 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AL670379.7-201ENST00000605823 252 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AL451064.1-201ENST00000607718 471 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AC006566.1-201ENST00000608943 513 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AC013562.2-201ENST00000611632 603 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 MIR7975-201ENST00000619350 68 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 U6.105-201ENST00000637379 88 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 FARSBP1-201ENST00000435808 1778 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 AC022336.2-201ENST00000568966 2538 ntBASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC71LQ8N9Z2 MTND5P29-201ENST00000458676 1807 ntBASIC2.21□□□□□ -2.05
CCDC71LQ8N9Z2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 OR5J1P-201ENST00000313544 939 ntBASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 SNORA25.6-201ENST00000364121 118 ntBASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 SNORD46.1-201ENST00000364139 104 ntBASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 SMIM11P1-201ENST00000369586 178 ntBASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 RNU6-348P-201ENST00000384386 107 ntBASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 MIR183-201ENST00000384958 110 ntBASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 MIR888-201ENST00000401186 77 ntBASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 AL513475.1-201ENST00000406602 315 ntBASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 RNA5SP120-201ENST00000410900 112 ntBASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 RPL31P35-201ENST00000431058 377 ntBASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 RNU7-26P-201ENST00000458980 63 ntBASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 RN7SL807P-201ENST00000470923 297 ntBASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 AC090096.1-201ENST00000489168 390 ntBASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 AC022447.1-201ENST00000515358 464 ntBASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 GLYCAM1-201ENST00000546596 285 ntBASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC71LQ8N9Z2 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms