Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AL138889.2-201ENST00000603883 242 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 MIR15A-201ENST00000607334 83 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AC104458.1-201ENST00000608243 463 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.04□□□□□ -1.92
BEST3Q8N1M1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AP001148.1-201ENST00000624124 2359 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AL136164.4-201ENST00000625013 2135 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AL359693.1-201ENST00000614959 2407 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 RNA5SP383-201ENST00000362934 120 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 Y_RNA.89-201ENST00000363031 102 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 RNU6-550P-201ENST00000391057 101 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AL592045.1-201ENST00000429867 352 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 MRPS10P2-201ENST00000431226 381 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 GTF2IP20-201ENST00000431663 360 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AL139415.2-201ENST00000431968 163 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AL118520.1-201ENST00000450770 291 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 SSXP4-201ENST00000451349 245 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 FABP5P15-201ENST00000453566 214 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 SNRPFP3-201ENST00000457792 225 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 RPS29P2-201ENST00000479278 136 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 RNA5SP401-201ENST00000515920 127 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 SNORA64.4-201ENST00000516632 81 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AC092325.1-201ENST00000566449 554 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 MIR5004-201ENST00000579078 107 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 BNIP3P30-201ENST00000601184 574 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AC136601.2-201ENST00000604356 474 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AC008962.1-201ENST00000605729 304 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.03□□□□□ -1.92
BEST3Q8N1M1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
BEST3Q8N1M1 AC017071.1-201ENST00000564407 2204 ntBASIC3.03□□□□□ -1.93
BEST3Q8N1M1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
BEST3Q8N1M1 AC007496.3-201ENST00000624987 3443 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
BEST3Q8N1M1 Y_RNA.38-201ENST00000362617 102 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 RNY3P3-201ENST00000363816 102 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 Y_RNA.295-201ENST00000364918 102 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
BEST3Q8N1M1 RNU6-877P-201ENST00000383868 107 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 CISD1P1-201ENST00000393907 327 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.02□□□□□ -1.93
BEST3Q8N1M1 SNRPEP10-201ENST00000420249 274 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.02□□□□□ -1.93
BEST3Q8N1M1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AL160275.3-201ENST00000423876 471 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AC012498.1-201ENST00000424037 437 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 ZNF863P-201ENST00000426746 417 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 RPL23AP82-202ENST00000427528 469 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.02□□□□□ -1.93
BEST3Q8N1M1 HMGB3P11-201ENST00000440127 604 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AL671855.1-201ENST00000446875 1203 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AC104058.1-201ENST00000448028 297 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 MTCO3P38-201ENST00000468910 766 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 EIF4EP3-201ENST00000498782 656 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.02□□□□□ -1.93
BEST3Q8N1M1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
BEST3Q8N1M1 SNORD60.2-201ENST00000516883 86 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AC068657.1-201ENST00000520807 306 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.02□□□□□ -1.93
BEST3Q8N1M1 HIF1AP1-201ENST00000553642 175 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AP000907.4-201ENST00000604143 237 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AC107294.3-201ENST00000609211 526 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 DISC2.1-201ENST00000612827 205 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AL157817.1-201ENST00000614264 790 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AC002553.4-201ENST00000616896 331 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AC068831.7-201ENST00000616954 363 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AL512643.1-201ENST00000635735 524 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 Z99571.1-201ENST00000636677 394 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.02□□□□□ -1.93
BEST3Q8N1M1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.02□□□□□ -1.93
BEST3Q8N1M1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.02□□□□□ -1.93
BEST3Q8N1M1 AC093908.1-201ENST00000623125 8092 ntBASIC3.02□□□□□ -1.93
BEST3Q8N1M1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms