Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.06□□□□□ -2.08
CDKL3Q8IVW4 AC025165.5-201ENST00000602802 578 ntBASIC2.06□□□□□ -2.08
CDKL3Q8IVW4 APOOP1-201ENST00000604695 592 ntBASIC2.06□□□□□ -2.08
CDKL3Q8IVW4 AC239868.4-201ENST00000608318 671 ntBASIC2.06□□□□□ -2.08
CDKL3Q8IVW4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.06□□□□□ -2.08
CDKL3Q8IVW4 SDR42E1P4-201ENST00000620894 481 ntBASIC2.06□□□□□ -2.08
CDKL3Q8IVW4 AC103706.2-201ENST00000638080 240 ntBASIC2.06□□□□□ -2.08
CDKL3Q8IVW4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CDKL3Q8IVW4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CDKL3Q8IVW4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.06□□□□□ -2.08
CDKL3Q8IVW4 MTND5P33-201ENST00000571250 1450 ntBASIC2.06□□□□□ -2.08
CDKL3Q8IVW4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 RNU6-931P-201ENST00000363850 107 ntBASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 AL023284.1-201ENST00000403956 276 ntBASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 MIR1305-201ENST00000408300 86 ntBASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 RNA5SP425-201ENST00000410336 112 ntBASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 AC096638.1-201ENST00000444678 216 ntBASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 AL160314.1-201ENST00000490836 438 ntBASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 RNU5A-4P-201ENST00000516588 111 ntBASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 AC013828.2-201ENST00000532487 235 ntBASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 AC010186.2-204ENST00000537668 439 ntBASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 BNIP3P40-201ENST00000596017 556 ntBASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 BNIP3P23-201ENST00000599655 511 ntBASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 AC098657.3-201ENST00000620434 263 ntBASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 AP000676.3-201ENST00000623299 569 ntBASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 MIR219B-201ENST00000637023 88 ntBASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CDKL3Q8IVW4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 RNA5SP88-201ENST00000365560 109 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 MIR19A-201ENST00000384878 82 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 RNA5SP270-201ENST00000411361 118 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 NDUFS5P4-201ENST00000412983 318 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AL008987.1-201ENST00000415528 237 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 USP9YP13-201ENST00000417797 480 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 Z98742.3-201ENST00000418637 326 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 MED14P1-201ENST00000430517 648 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AC098831.1-201ENST00000440661 216 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 MTATP6P30-201ENST00000443540 664 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AC010095.1-201ENST00000443543 144 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AC124916.1-201ENST00000444020 547 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AL353705.4-201ENST00000449661 238 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AC010631.1-201ENST00000474150 156 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 RPL9P6-201ENST00000492764 598 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 HSPE1P23-201ENST00000509838 286 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AC110760.3-202ENST00000515177 371 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AL133153.1-201ENST00000557756 303 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AC110491.1-201ENST00000562191 2010 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AC092125.1-201ENST00000562568 1995 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 MIR544B-201ENST00000582372 78 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AC004908.2-201ENST00000609090 574 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AC103710.1-201ENST00000610003 901 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AL589743.7-201ENST00000612637 233 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 AC012150.2-201ENST00000621300 544 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 MIR7157-201ENST00000635801 60 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CDKL3Q8IVW4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 AC004520.1-201ENST00000608362 1413 ntBASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 AC092881.1-201ENST00000638218 2733 ntBASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 HSPE1P11-201ENST00000339579 310 ntBASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 RNU6-769P-201ENST00000384407 104 ntBASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 AC119751.3-201ENST00000399720 670 ntBASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 AL139397.2-201ENST00000404529 772 ntBASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 RN7SKP223-201ENST00000410582 62 ntBASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 RPL17P12-201ENST00000413391 526 ntBASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 RPL21P24-201ENST00000413752 448 ntBASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 BPY2DP-201ENST00000422208 265 ntBASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 MICF-203ENST00000432679 129 ntBASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 AC004383.1-201ENST00000438135 289 ntBASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.03□□□□□ -2.08
CDKL3Q8IVW4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms