Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 UBL5P2-201ENST00000583788 219 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AC012493.2-201ENST00000595083 291 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 BNIP3P9-201ENST00000603714 553 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 MTND4LP5-201ENST00000605152 292 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AC004805.2-201ENST00000605382 482 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AL121992.2-201ENST00000606262 256 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AL627309.6-201ENST00000606857 840 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AC022893.3-201ENST00000607665 437 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AC013562.2-201ENST00000611632 603 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 Z99129.1-201ENST00000612510 255 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 MIR8057-201ENST00000620957 69 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 LRRC77P-213ENST00000637727 880 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AC010329.5-201ENST00000623497 2174 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 MIR148B-201ENST00000362252 99 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 RNU6-74P-201ENST00000384235 107 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 SNORA24.1-201ENST00000384401 135 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 RNU6-750P-201ENST00000390946 107 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 RPL21P3-201ENST00000395517 478 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 RNU2-66P-201ENST00000410650 161 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AC023141.4-201ENST00000412031 328 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 RPL26P27-201ENST00000414397 437 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AC114491.1-201ENST00000416095 246 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AL139281.1-201ENST00000422120 335 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 MTCO2P11-201ENST00000431069 680 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 MTATP6P16-201ENST00000434543 526 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AL445687.1-201ENST00000439946 251 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AC098831.1-201ENST00000440661 216 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AC022364.2-201ENST00000457963 554 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AC146507.2-201ENST00000460608 476 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 RPS3AP17-201ENST00000472594 777 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AC023194.1-201ENST00000493084 308 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AC116562.3-201ENST00000506136 177 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 RNU6-143P-201ENST00000516942 93 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 RNA5SP165-201ENST00000517142 115 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AP003392.2-201ENST00000527269 208 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AC068587.5-201ENST00000528506 175 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AC009063.1-201ENST00000563342 702 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AGGF1P4-201ENST00000568249 801 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AC110491.1-201ENST00000562191 2010 ntBASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NUP54Q7Z3B4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 RNU6-179P-201ENST00000363350 107 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 Y_RNA.367-201ENST00000365544 101 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 RNU6-456P-201ENST00000384493 107 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 Y_RNA.534-201ENST00000384599 112 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 SNORA46-201ENST00000384762 135 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 RNU2-68P-201ENST00000410878 191 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AC080125.1-201ENST00000414888 684 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AC010975.2-201ENST00000427781 588 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AL592045.1-201ENST00000429867 352 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AL591704.1-201ENST00000432574 275 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 RPL36AP53-201ENST00000432891 316 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AC128713.1-201ENST00000471495 306 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AC103975.1-201ENST00000482506 483 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AC108078.2-201ENST00000510750 236 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AC010493.1-201ENST00000513479 292 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 RN7SKP43-201ENST00000516173 320 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 Y_RNA.689-201ENST00000516589 107 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 PSMA2P1-201ENST00000526365 646 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AP001646.1-201ENST00000527936 915 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 MIR3117-201ENST00000584034 78 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AL355598.1-201ENST00000604169 202 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AL139286.2-201ENST00000606838 396 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 HULC.1-201ENST00000612720 240 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AC130324.3-201ENST00000614165 542 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 AL359547.2-201ENST00000615810 418 ntBASIC2.85□□□□□ -1.95
NUP54Q7Z3B4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms