Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 MTND5P9-201ENST00000503854 1755 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 RNA5SP388-201ENST00000362584 119 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 RN7SKP227-201ENST00000364445 330 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 RNA5SP235-201ENST00000365411 114 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 RNU6-629P-201ENST00000384061 103 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 RNA5SP332-201ENST00000391063 115 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 SNORD56-201ENST00000413522 71 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 RPL21P38-201ENST00000418090 167 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 RPL23AP25-201ENST00000430973 463 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 MTND5P15-201ENST00000434246 349 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 AL590664.1-201ENST00000448065 339 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 U8.21-201ENST00000459536 136 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 AC025465.3-201ENST00000510570 311 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 AC012433.1-201ENST00000588916 398 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 AC006557.5-201ENST00000603126 811 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 AC073410.2-201ENST00000603240 332 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 AL355810.1-201ENST00000614629 552 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 AC007546.2-201ENST00000623996 360 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 DDX18P3-201ENST00000404856 2007 ntBASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF111Q6ZNA4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
RNF111Q6ZNA4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
RNF111Q6ZNA4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RNF111Q6ZNA4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.73
RNF111Q6ZNA4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RNF111Q6ZNA4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 SDAD1P2-201ENST00000441308 2028 ntBASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 MIR412-201ENST00000362142 91 ntBASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 Y_RNA.592-201ENST00000410274 109 ntBASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 RNA5SP494-201ENST00000410653 129 ntBASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 EIF4EP2-201ENST00000422816 654 ntBASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 RPS29P33-201ENST00000456717 146 ntBASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 RNU6-111P-201ENST00000517179 105 ntBASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 AC034114.1-201ENST00000520293 285 ntBASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 AC090281.1-201ENST00000523019 276 ntBASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 AC103996.1-201ENST00000555468 102 ntBASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 MIR5696-201ENST00000578474 85 ntBASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 AC004852.3-201ENST00000614131 326 ntBASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 AP000346.3-201ENST00000622821 210 ntBASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 OR56B2P-202ENST00000641377 2453 ntBASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF111Q6ZNA4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 RNU6-212P-201ENST00000362642 104 ntBASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 SNORD14B-201ENST00000364533 90 ntBASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 MIR129-1-201ENST00000384972 72 ntBASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 RNU6-121P-201ENST00000410525 99 ntBASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 RNU6-130P-201ENST00000411112 103 ntBASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 RAC1P3-201ENST00000416129 580 ntBASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 MTND3P9-201ENST00000429526 346 ntBASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 RPEP5-201ENST00000441137 268 ntBASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 AC012671.1-201ENST00000451912 203 ntBASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 RPL23AP45-201ENST00000476406 468 ntBASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 AC098869.1-201ENST00000481627 292 ntBASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 VWA8P1-201ENST00000510889 176 ntBASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 FTH1P9-201ENST00000513251 355 ntBASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 RNU6-138P-201ENST00000515952 107 ntBASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 SNORA31.20-201ENST00000517111 133 ntBASIC4.2□□□□□ -1.74
RNF111Q6ZNA4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms