Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 AL603908.1-201ENST00000406098 201 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 MIR548I3-201ENST00000408378 149 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 MIR548I1-201ENST00000408810 149 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 Y_RNA.592-201ENST00000410274 109 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 CYP4F29P-201ENST00000420685 446 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 AL627311.1-201ENST00000431514 115 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 SUMO1P3-201ENST00000439961 304 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 snoU13.24-201ENST00000458998 104 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 AL359273.1-201ENST00000510918 627 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNU6-1023P-201ENST00000516137 106 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 AP003733.2-201ENST00000529409 171 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 MIR4277-201ENST00000578298 84 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 MIR5096-201ENST00000583713 70 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC008121.1-201ENST00000603244 268 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC079587.1-201ENST00000603846 277 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC008745.1-201ENST00000604064 271 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 AL160290.3-201ENST00000604869 165 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 AL365434.2-201ENST00000607979 234 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 MIR6748-201ENST00000610433 71 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC090617.7-201ENST00000623952 126 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 MFSD8-216ENST00000641147 4009 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC116096.1-201ENST00000566804 2314 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 AP000560.1-201ENST00000624150 1937 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNU6-428P-201ENST00000362942 107 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNU6-1093P-201ENST00000391194 107 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNU6-130P-201ENST00000411112 103 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 NDUFB4P7-201ENST00000423198 363 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 RPL27AP8-201ENST00000424277 446 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 MTND4LP30-201ENST00000454092 297 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 RN7SL98P-201ENST00000462271 300 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 RPL39P38-201ENST00000467018 153 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 RPL21P13-201ENST00000488305 481 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 HMGB1P35-201ENST00000503360 598 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 HMGB3P17-201ENST00000504195 649 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC007458.1-201ENST00000542812 373 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 MIR3921-201ENST00000577308 85 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC113403.1-201ENST00000604910 193 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC090132.2-201ENST00000615881 347 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 AL138721.1-201ENST00000616756 179 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 U6.104-201ENST00000637979 90 ntBASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQA1Q5Y7H0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 MIR331-201ENST00000362302 94 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNU1-32P-201ENST00000363937 159 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNA5SP22-201ENST00000365393 109 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNA5SP151-201ENST00000365632 117 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 Y_RNA.562-201ENST00000384695 113 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNU6-121P-201ENST00000410525 99 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 ELOCP19-201ENST00000411919 318 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC016397.1-201ENST00000412463 242 ntBASIC4.06□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC009237.10-201ENST00000414112 510 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms