Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 RNU6-772P-201ENST00000516042 105 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 RNU6-966P-201ENST00000516479 104 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 UBL5P4-201ENST00000562584 236 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 AL670379.3-201ENST00000605040 251 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 AL078604.3-201ENST00000615580 211 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 AC087385.3-201ENST00000620477 187 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 AC022893.2-201ENST00000564832 3296 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 AC008555.8-201ENST00000623602 2168 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 GVINP1-202ENST00000531871 7271 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 RN7SKP185-201ENST00000362813 326 ntBASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 RNA5SP443-201ENST00000363083 132 ntBASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 snoU2_19.4-201ENST00000364329 80 ntBASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 U8.6-201ENST00000364939 135 ntBASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 Y_RNA.388-201ENST00000383919 113 ntBASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 MIR34A-201ENST00000385130 110 ntBASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 RNA5SP56-201ENST00000410277 118 ntBASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 Y_RNA.595-201ENST00000410403 105 ntBASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 AC124916.1-201ENST00000444020 547 ntBASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 AC083982.1-201ENST00000485679 344 ntBASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 SNORD116-26-201ENST00000516006 96 ntBASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 AL390726.5-202ENST00000564800 256 ntBASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 AC091905.4-201ENST00000623432 202 ntBASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 AL773545.4-201ENST00000637262 310 ntBASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 AL513478.4-201ENST00000641636 310 ntBASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 AL031595.2-201ENST00000624215 19071 ntBASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNFT1Q5M7Z0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 PCAT14-202ENST00000627127 3935 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 RNU6-1167P-201ENST00000363227 94 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 Y_RNA.251-201ENST00000364551 99 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 RNU6-915P-201ENST00000364943 103 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 OR2AM1P-201ENST00000422137 422 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 DDX39BP1-205ENST00000422507 192 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 AC006466.1-201ENST00000438721 289 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 AL031737.1-201ENST00000450125 223 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 RN7SL189P-201ENST00000468631 289 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 GLUD1P3-202ENST00000508551 200 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 AC008033.2-201ENST00000542626 177 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 DEFB117-201ENST00000602356 141 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 AL161798.1-201ENST00000604630 131 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 MIR6844-201ENST00000637122 62 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 MTND5P35-201ENST00000557537 1720 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 AL022311.1-201ENST00000623726 19416 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 AC116096.1-201ENST00000566804 2314 ntBASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNFT1Q5M7Z0 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 AL592437.2-201ENST00000421655 2434 ntBASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 CUL1P1-201ENST00000509510 2425 ntBASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms