Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 U8.18-201ENST00000459285 133 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 HMGN2P26-201ENST00000463169 339 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 RPL21P99-201ENST00000480369 423 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 RPL21P93-201ENST00000480465 489 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 RNU2-69P-201ENST00000516061 100 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 RNU6-1038P-201ENST00000516516 104 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 RNU6-358P-201ENST00000516564 75 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 RNA5SP380-201ENST00000517190 98 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 RNU1-45P-201ENST00000517191 141 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 AC025755.1-201ENST00000521306 278 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 AC078814.3-201ENST00000553036 491 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 NRBF2P5-201ENST00000603087 788 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 RNU6-89P-201ENST00000606519 100 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 AL138880.2-201ENST00000616214 239 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 AC006111.3-201ENST00000622137 383 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 AC073308.1-201ENST00000623696 305 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 AC017071.1-201ENST00000564407 2204 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 GABRG2-229ENST00000641017 3628 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 MTND4P35-201ENST00000604257 1375 ntBASIC3.25□□□□□ -1.89
RUNDC3AQ59EK9 AC007256.1-201ENST00000392253 2765 ntBASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 RNU6-778P-201ENST00000363269 103 ntBASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 RNU6-884P-201ENST00000363889 107 ntBASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 RNU6-45P-201ENST00000384471 107 ntBASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 RNA5SP293-201ENST00000410527 113 ntBASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 AC126124.2-201ENST00000413542 321 ntBASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 WASF1P1-201ENST00000447560 1131 ntBASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 AC125238.1-201ENST00000448842 249 ntBASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 snoU13.28-201ENST00000459235 104 ntBASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 AP002812.1-201ENST00000495378 474 ntBASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 AC116353.2-201ENST00000505332 712 ntBASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 AL391261.3-201ENST00000557194 520 ntBASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 MTCO3P23-201ENST00000561363 289 ntBASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.24□□□□□ -1.89
RUNDC3AQ59EK9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 AL079305.1-201ENST00000623159 3008 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 RNU6-522P-201ENST00000364497 107 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 Y_RNA.378-201ENST00000365652 113 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 RNU6-393P-201ENST00000384475 107 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 MIR591-201ENST00000385290 95 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 MIR888-201ENST00000401186 77 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 RNA5SP118-201ENST00000410385 109 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 ATP5A1P2-201ENST00000412323 255 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 Z99755.1-201ENST00000414048 380 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 BX682237.1-201ENST00000415016 335 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 AC245291.1-201ENST00000419501 328 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 ERLEC1P1-201ENST00000433806 578 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 AC073063.1-201ENST00000434352 607 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 RPL31P58-201ENST00000469001 379 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 AC091885.1-201ENST00000506658 268 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 AC104136.1-201ENST00000512969 394 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 LRRC34P2-201ENST00000514850 553 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 SNORA31.1-201ENST00000515993 133 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 SNORA31.5-201ENST00000516190 133 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 SNORA64.4-201ENST00000516632 81 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 RNU6-703P-201ENST00000516946 107 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 CENPUP1-201ENST00000526649 1202 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 AC012119.1-201ENST00000603184 222 ntBASIC3.23□□□□□ -1.89
RUNDC3AQ59EK9 AC004520.1-201ENST00000608362 1413 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms