Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 AL358472.1-201ENST00000431295 329 ntBASIC4.01□□□□□ -1.77
USP39Q53GS9 CKS1BP5-201ENST00000434172 273 ntBASIC4.01□□□□□ -1.77
USP39Q53GS9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.01□□□□□ -1.77
USP39Q53GS9 HIGD1AP11-201ENST00000438361 280 ntBASIC4.01□□□□□ -1.77
USP39Q53GS9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.01□□□□□ -1.77
USP39Q53GS9 RPS11P1-201ENST00000451072 473 ntBASIC4.01□□□□□ -1.77
USP39Q53GS9 HMGN2P7-201ENST00000456186 273 ntBASIC4.01□□□□□ -1.77
USP39Q53GS9 RPL9P32-201ENST00000464118 620 ntBASIC4.01□□□□□ -1.77
USP39Q53GS9 PPIAP15-201ENST00000479662 484 ntBASIC4.01□□□□□ -1.77
USP39Q53GS9 AC092451.1-201ENST00000480211 153 ntBASIC4.01□□□□□ -1.77
USP39Q53GS9 HMGN1P11-201ENST00000508668 303 ntBASIC4.01□□□□□ -1.77
USP39Q53GS9 AC108078.2-201ENST00000510750 236 ntBASIC4.01□□□□□ -1.77
USP39Q53GS9 RNA5SP179-201ENST00000517284 121 ntBASIC4.01□□□□□ -1.77
USP39Q53GS9 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.01□□□□□ -1.77
USP39Q53GS9 IGLVIV-53-201ENST00000520107 367 ntBASIC4.01□□□□□ -1.77
USP39Q53GS9 AC092470.1-201ENST00000546187 132 ntBASIC4.01□□□□□ -1.77
USP39Q53GS9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.01□□□□□ -1.77
USP39Q53GS9 AC007179.3-201ENST00000604976 235 ntBASIC4.01□□□□□ -1.77
USP39Q53GS9 AC100812.1-201ENST00000607622 580 ntBASIC4.01□□□□□ -1.77
USP39Q53GS9 AC012531.5-201ENST00000611375 151 ntBASIC4.01□□□□□ -1.77
USP39Q53GS9 PISRT1.1-201ENST00000616930 107 ntBASIC4.01□□□□□ -1.77
USP39Q53GS9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.01□□□□□ -1.77
USP39Q53GS9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.01□□□□□ -1.77
USP39Q53GS9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.01□□□□□ -1.77
USP39Q53GS9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4□□□□□ -1.77
USP39Q53GS9 AL133383.2-201ENST00000622958 2336 ntBASIC4□□□□□ -1.77
USP39Q53GS9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
USP39Q53GS9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP39Q53GS9 AC091812.1-201ENST00000432235 1948 ntBASIC4□□□□□ -1.77
USP39Q53GS9 SNORA31-201ENST00000362607 130 ntBASIC4□□□□□ -1.77
USP39Q53GS9 RNU6-266P-201ENST00000364225 107 ntBASIC4□□□□□ -1.77
USP39Q53GS9 RNU6-450P-201ENST00000364654 107 ntBASIC4□□□□□ -1.77
USP39Q53GS9 RNA5SP189-201ENST00000364920 115 ntBASIC4□□□□□ -1.77
USP39Q53GS9 Y_RNA.389-201ENST00000383924 113 ntBASIC4□□□□□ -1.77
USP39Q53GS9 Y_RNA.396-201ENST00000383949 103 ntBASIC4□□□□□ -1.77
USP39Q53GS9 SNORA5A-201ENST00000384111 134 ntBASIC4□□□□□ -1.77
USP39Q53GS9 Y_RNA.485-201ENST00000384395 102 ntBASIC4□□□□□ -1.77
USP39Q53GS9 MIR34B-201ENST00000385076 84 ntBASIC4□□□□□ -1.77
USP39Q53GS9 SNORA16.2-201ENST00000390991 127 ntBASIC4□□□□□ -1.77
USP39Q53GS9 RNU6-823P-201ENST00000391042 103 ntBASIC4□□□□□ -1.77
USP39Q53GS9 U3.29-201ENST00000391296 212 ntBASIC4□□□□□ -1.77
USP39Q53GS9 RNU6-387P-201ENST00000411331 105 ntBASIC4□□□□□ -1.77
USP39Q53GS9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4□□□□□ -1.77
USP39Q53GS9 AC243428.1-201ENST00000421099 264 ntBASIC4□□□□□ -1.77
USP39Q53GS9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4□□□□□ -1.77
USP39Q53GS9 ARL5AP4-201ENST00000430731 512 ntBASIC4□□□□□ -1.77
USP39Q53GS9 AC236972.1-201ENST00000433225 199 ntBASIC4□□□□□ -1.77
USP39Q53GS9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4□□□□□ -1.77
USP39Q53GS9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4□□□□□ -1.77
USP39Q53GS9 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4□□□□□ -1.77
USP39Q53GS9 LAMTOR5P1-201ENST00000444290 270 ntBASIC4□□□□□ -1.77
USP39Q53GS9 RPS17P13-201ENST00000448974 407 ntBASIC4□□□□□ -1.77
USP39Q53GS9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4□□□□□ -1.77
USP39Q53GS9 PCNPP5-201ENST00000452246 481 ntBASIC4□□□□□ -1.77
USP39Q53GS9 AC104472.2-201ENST00000469035 601 ntBASIC4□□□□□ -1.77
USP39Q53GS9 AC068781.1-201ENST00000488231 618 ntBASIC4□□□□□ -1.77
USP39Q53GS9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4□□□□□ -1.77
USP39Q53GS9 TBCAP3-201ENST00000512475 312 ntBASIC4□□□□□ -1.77
USP39Q53GS9 GNAI2P1-201ENST00000541815 315 ntBASIC4□□□□□ -1.77
USP39Q53GS9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4□□□□□ -1.77
USP39Q53GS9 AC012468.1-201ENST00000604888 430 ntBASIC4□□□□□ -1.77
USP39Q53GS9 AC091167.4-201ENST00000605079 184 ntBASIC4□□□□□ -1.77
USP39Q53GS9 ATP5A1P2-202ENST00000616464 443 ntBASIC4□□□□□ -1.77
USP39Q53GS9 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
USP39Q53GS9 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
USP39Q53GS9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4□□□□□ -1.77
USP39Q53GS9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4□□□□□ -1.77
USP39Q53GS9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP39Q53GS9 OSBPL9P4-201ENST00000371707 1800 ntBASIC4□□□□□ -1.77
USP39Q53GS9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP39Q53GS9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4□□□□□ -1.77
USP39Q53GS9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP39Q53GS9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
USP39Q53GS9 Y_RNA.399-201ENST00000383955 105 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 Y_RNA.447-201ENST00000384184 113 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 RPL21P17-201ENST00000397467 475 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 AL583834.1-201ENST00000406943 343 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 RNU2-37P-201ENST00000410695 177 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 RNA5SP39-201ENST00000411245 120 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 RNU2-64P-201ENST00000411315 191 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
USP39Q53GS9 AL139247.1-201ENST00000422768 325 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.99□□□□□ -1.77
USP39Q53GS9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.99□□□□□ -1.77
USP39Q53GS9 MTCO3P45-201ENST00000443036 613 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.99□□□□□ -1.77
USP39Q53GS9 AL590399.6-201ENST00000446396 307 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.99□□□□□ -1.77
USP39Q53GS9 SNORD97-201ENST00000459187 142 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 RPL21P11-201ENST00000461458 483 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 AC117503.1-201ENST00000472241 394 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 RPS26P15-201ENST00000488067 348 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 AC135721.1-201ENST00000497954 479 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 AC016065.2-201ENST00000514530 444 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 RNU6-408P-201ENST00000515910 100 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 SNORA14.1-201ENST00000516113 141 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 RNU6-1143P-201ENST00000516125 104 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 RNA5SP384-201ENST00000516615 116 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 RNU7-143P-201ENST00000516781 65 ntBASIC3.99□□□□□ -1.77
USP39Q53GS9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms