Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 OR5B10P-201ENST00000532869 642 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 AL512360.1-201ENST00000555346 234 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 MIR5692A1-201ENST00000580523 69 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 MIR3944-201ENST00000581277 108 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC38Q502W7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CCDC38Q502W7 AL034408.1-202ENST00000636088 415 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 U6.99-201ENST00000637524 83 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 AC009093.8-201ENST00000641769 292 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 AC110491.1-201ENST00000562191 2010 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CCDC38Q502W7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC38Q502W7 RNU6-552P-201ENST00000362869 119 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 RNA5SP197-201ENST00000363357 119 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 RNU1-105P-201ENST00000363470 161 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 RNA5SP139-201ENST00000364340 117 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 RNU6-1027P-201ENST00000383998 107 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 MIR23A-201ENST00000385245 73 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 SNORA40C-201ENST00000391285 128 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 AL590002.1-201ENST00000406554 418 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 RN7SKP58-201ENST00000411010 305 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC38Q502W7 MTCYBP8-201ENST00000422855 651 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC38Q502W7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC38Q502W7 YME1L1P1-201ENST00000429435 297 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 CYCSP4-201ENST00000429682 331 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 ATP5JP1-201ENST00000431631 322 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC073063.1-201ENST00000434352 607 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC098831.1-201ENST00000440661 216 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC38Q502W7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC073415.1-201ENST00000449240 153 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 CACYBPP2-201ENST00000453625 678 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC006483.1-201ENST00000487308 313 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 RPL21P13-201ENST00000488305 481 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC022493.1-201ENST00000492984 337 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC38Q502W7 SNORA31.19-201ENST00000517079 126 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC38Q502W7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC007536.1-201ENST00000533382 349 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC027807.1-201ENST00000559921 996 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC025678.1-201ENST00000567861 338 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC38Q502W7 MIR3922-201ENST00000585192 84 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC146944.4-201ENST00000602697 718 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC093788.1-201ENST00000609356 927 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 U6.42-201ENST00000618440 107 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 AC012442.3-202ENST00000636742 206 ntBASIC3.46□□□□□ -1.86
CCDC38Q502W7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC38Q502W7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC38Q502W7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC38Q502W7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC38Q502W7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC38Q502W7 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CCDC38Q502W7 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 Y_RNA.372-201ENST00000365599 102 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 MIR7-3-201ENST00000384898 110 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 MIR449B-201ENST00000384995 97 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 SAR1AP2-201ENST00000392696 594 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 AC006946.1-201ENST00000429106 328 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC38Q502W7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC38Q502W7 SNRPFP3-201ENST00000457792 225 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 AC106707.2-201ENST00000484182 374 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC38Q502W7 AC104136.1-201ENST00000512969 394 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 RNU6-1183P-201ENST00000517054 60 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC38Q502W7 AC022634.1-201ENST00000520765 532 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 SUB1P1-201ENST00000524415 382 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC38Q502W7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC38Q502W7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC38Q502W7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC38Q502W7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC38Q502W7 MIR4782-201ENST00000577987 79 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC38Q502W7 AC006557.5-201ENST00000603126 811 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 AC073476.4-201ENST00000628409 72 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 MTND4P14-201ENST00000435799 1354 ntBASIC3.45□□□□□ -1.86
CCDC38Q502W7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.45□□□□□ -1.86
CCDC38Q502W7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC38Q502W7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC38Q502W7 MIR412-201ENST00000362142 91 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 RNU4-35P-201ENST00000362588 141 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 SNORA69-201ENST00000383895 132 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 SNORA75B-201ENST00000384053 137 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 MIR578-201ENST00000384828 96 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 SNORD17-201ENST00000390930 237 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 RNU6-780P-201ENST00000391030 104 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms