Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.24□□□□□ -1.89
PDS5AQ29RF7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PDS5AQ29RF7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.23□□□□□ -1.89
PDS5AQ29RF7 RNU6-960P-201ENST00000364056 120 ntBASIC3.23□□□□□ -1.89
PDS5AQ29RF7 SNORA23-201ENST00000365128 182 ntBASIC3.23□□□□□ -1.89
PDS5AQ29RF7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.23□□□□□ -1.89
PDS5AQ29RF7 MIR887-201ENST00000401258 79 ntBASIC3.23□□□□□ -1.89
PDS5AQ29RF7 MIR1277-201ENST00000408536 78 ntBASIC3.23□□□□□ -1.89
PDS5AQ29RF7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.23□□□□□ -1.89
PDS5AQ29RF7 RPL23AP30-201ENST00000432419 501 ntBASIC3.23□□□□□ -1.89
PDS5AQ29RF7 RPL21P112-201ENST00000434403 463 ntBASIC3.23□□□□□ -1.89
PDS5AQ29RF7 RPS15AP9-201ENST00000439856 381 ntBASIC3.23□□□□□ -1.89
PDS5AQ29RF7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.23□□□□□ -1.89
PDS5AQ29RF7 AC027673.1-201ENST00000456245 405 ntBASIC3.23□□□□□ -1.89
PDS5AQ29RF7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.23□□□□□ -1.89
PDS5AQ29RF7 AC010285.1-201ENST00000470580 392 ntBASIC3.23□□□□□ -1.89
PDS5AQ29RF7 RPS27AP1-201ENST00000475545 471 ntBASIC3.23□□□□□ -1.89
PDS5AQ29RF7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.23□□□□□ -1.89
PDS5AQ29RF7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.23□□□□□ -1.89
PDS5AQ29RF7 AC105914.1-201ENST00000511798 226 ntBASIC3.23□□□□□ -1.89
PDS5AQ29RF7 RNU7-51P-201ENST00000516560 62 ntBASIC3.23□□□□□ -1.89
PDS5AQ29RF7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.23□□□□□ -1.89
PDS5AQ29RF7 AC109635.4-202ENST00000531666 412 ntBASIC3.23□□□□□ -1.89
PDS5AQ29RF7 AL355836.1-201ENST00000555951 870 ntBASIC3.23□□□□□ -1.89
PDS5AQ29RF7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.23□□□□□ -1.89
PDS5AQ29RF7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.23□□□□□ -1.89
PDS5AQ29RF7 AP001596.2-201ENST00000608410 312 ntBASIC3.23□□□□□ -1.89
PDS5AQ29RF7 AC004067.1-201ENST00000608733 700 ntBASIC3.23□□□□□ -1.89
PDS5AQ29RF7 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PDS5AQ29RF7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.23□□□□□ -1.89
PDS5AQ29RF7 FRG1KP-201ENST00000623592 341 ntBASIC3.23□□□□□ -1.89
PDS5AQ29RF7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.23□□□□□ -1.89
PDS5AQ29RF7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDS5AQ29RF7 AC073343.1-201ENST00000328239 651 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PDS5AQ29RF7 MIR449A-201ENST00000362113 91 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 Y_RNA.22-201ENST00000362492 102 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 RNU6-600P-201ENST00000362524 99 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 RNU6-1322P-201ENST00000364309 107 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 Y_RNA.256-201ENST00000364594 104 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.22□□□□□ -1.89
PDS5AQ29RF7 RNU6-483P-201ENST00000384088 108 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 RNU6-1181P-201ENST00000384191 106 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 Y_RNA.453-201ENST00000384223 109 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 MIR1-2-201ENST00000384961 85 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 TXNP7-201ENST00000406296 293 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 RNU2-36P-201ENST00000410361 191 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.22□□□□□ -1.89
PDS5AQ29RF7 MTATP6P4-201ENST00000427725 675 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 MED13P1-201ENST00000428342 171 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.22□□□□□ -1.89
PDS5AQ29RF7 MTND1P2-201ENST00000430604 821 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.22□□□□□ -1.89
PDS5AQ29RF7 USP12PX-201ENST00000432383 1057 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 SNRPGP6-201ENST00000451124 220 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 AC008481.1-201ENST00000463278 396 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.22□□□□□ -1.89
PDS5AQ29RF7 AC010631.1-201ENST00000474150 156 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 AC126389.1-201ENST00000477436 290 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 KC877373.1-201ENST00000479066 408 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 RPL36AP51-201ENST00000487216 318 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 MTAPP1-201ENST00000489154 819 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.22□□□□□ -1.89
PDS5AQ29RF7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.22□□□□□ -1.89
PDS5AQ29RF7 HMGB1P41-201ENST00000520234 440 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.22□□□□□ -1.89
PDS5AQ29RF7 RPS3AP4-201ENST00000555161 764 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 AL133241.1-201ENST00000556832 487 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 FAM60BP-201ENST00000578364 658 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 AC012443.1-201ENST00000605605 231 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 AC005046.1-201ENST00000608515 625 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 AC092608.2-201ENST00000624427 218 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PDS5AQ29RF7 AL359693.1-201ENST00000614959 2407 ntBASIC3.22□□□□□ -1.89
PDS5AQ29RF7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PDS5AQ29RF7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.22□□□□□ -1.89
PDS5AQ29RF7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.21□□□□□ -1.89
PDS5AQ29RF7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
PDS5AQ29RF7 RPL9P7-201ENST00000330965 580 ntBASIC3.21□□□□□ -1.89
PDS5AQ29RF7 SNORA67.4-201ENST00000384688 142 ntBASIC3.21□□□□□ -1.89
PDS5AQ29RF7 MIR196B-201ENST00000384852 84 ntBASIC3.21□□□□□ -1.89
PDS5AQ29RF7 AL359634.1-202ENST00000404721 284 ntBASIC3.21□□□□□ -1.89
PDS5AQ29RF7 MTCO1P20-201ENST00000425366 358 ntBASIC3.21□□□□□ -1.89
PDS5AQ29RF7 AC079780.1-201ENST00000428259 207 ntBASIC3.21□□□□□ -1.89
PDS5AQ29RF7 AC024082.2-201ENST00000434771 238 ntBASIC3.21□□□□□ -1.89
PDS5AQ29RF7 HMGB3P12-201ENST00000438745 556 ntBASIC3.21□□□□□ -1.89
PDS5AQ29RF7 RPL26P6-201ENST00000440913 438 ntBASIC3.21□□□□□ -1.89
PDS5AQ29RF7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.21□□□□□ -1.89
PDS5AQ29RF7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.21□□□□□ -1.89
PDS5AQ29RF7 RPS26P21-201ENST00000475397 348 ntBASIC3.21□□□□□ -1.89
PDS5AQ29RF7 AC092989.1-201ENST00000481235 277 ntBASIC3.21□□□□□ -1.89
PDS5AQ29RF7 FAM92A1P2-202ENST00000504766 877 ntBASIC3.21□□□□□ -1.89
PDS5AQ29RF7 MLLT10P2-201ENST00000506434 249 ntBASIC3.21□□□□□ -1.89
PDS5AQ29RF7 MTND4LP22-201ENST00000508209 276 ntBASIC3.21□□□□□ -1.89
PDS5AQ29RF7 SNORD27.1-201ENST00000516319 72 ntBASIC3.21□□□□□ -1.89
PDS5AQ29RF7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.21□□□□□ -1.89
PDS5AQ29RF7 AC134698.4-201ENST00000523451 826 ntBASIC3.21□□□□□ -1.89
PDS5AQ29RF7 OR4R1P-201ENST00000529879 463 ntBASIC3.21□□□□□ -1.89
PDS5AQ29RF7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.21□□□□□ -1.89
PDS5AQ29RF7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.21□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms