Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 RPS12P2-201ENST00000439728 269 ntBASIC2.63□□□□□ -1.99
SIX1Q15475 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.63□□□□□ -1.99
SIX1Q15475 RPS24P13-201ENST00000442520 397 ntBASIC2.63□□□□□ -1.99
SIX1Q15475 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX1Q15475 SSXP4-201ENST00000451349 245 ntBASIC2.63□□□□□ -1.99
SIX1Q15475 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SIX1Q15475 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.63□□□□□ -1.99
SIX1Q15475 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX1Q15475 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX1Q15475 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX1Q15475 SCARNA24.1-201ENST00000516465 137 ntBASIC2.63□□□□□ -1.99
SIX1Q15475 RNU6-445P-201ENST00000516949 107 ntBASIC2.63□□□□□ -1.99
SIX1Q15475 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.63□□□□□ -1.99
SIX1Q15475 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.63□□□□□ -1.99
SIX1Q15475 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.63□□□□□ -1.99
SIX1Q15475 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX1Q15475 EIF1P4-201ENST00000572664 335 ntBASIC2.63□□□□□ -1.99
SIX1Q15475 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX1Q15475 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX1Q15475 DPPA3P3-201ENST00000603842 430 ntBASIC2.63□□□□□ -1.99
SIX1Q15475 AL033523.1-201ENST00000605153 153 ntBASIC2.63□□□□□ -1.99
SIX1Q15475 AC138649.3-201ENST00000622154 254 ntBASIC2.63□□□□□ -1.99
SIX1Q15475 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX1Q15475 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SIX1Q15475 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SIX1Q15475 MTND5P29-201ENST00000458676 1807 ntBASIC2.63□□□□□ -1.99
SIX1Q15475 AC103988.1-201ENST00000566382 2177 ntBASIC2.63□□□□□ -1.99
SIX1Q15475 AL137003.2-201ENST00000606924 2538 ntBASIC2.63□□□□□ -1.99
SIX1Q15475 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SIX1Q15475 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.62□□□□□ -1.99
SIX1Q15475 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SIX1Q15475 Y_RNA.22-201ENST00000362492 102 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 Y_RNA.41-201ENST00000362646 102 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 RNU6-960P-201ENST00000364056 120 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 RN7SKP226-201ENST00000364912 300 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 RNU6-108P-201ENST00000365558 107 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX1Q15475 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX1Q15475 GSTA9P-201ENST00000406231 611 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SIX1Q15475 RNA5SP181-201ENST00000410246 98 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 Z85995.1-201ENST00000415547 335 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 MED13P1-201ENST00000428342 171 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 AL590383.1-201ENST00000428602 75 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX1Q15475 MTCO2P11-201ENST00000431069 680 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 GPR143P-201ENST00000434155 205 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 CBWD4P-201ENST00000445695 655 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 AC132479.1-201ENST00000449160 144 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 RPS20P22-201ENST00000473700 357 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 HMGB1P29-201ENST00000505659 499 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 TTC39CP1-201ENST00000512513 755 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 SNORA31.3-201ENST00000516029 96 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 RNU6-927P-201ENST00000516199 100 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 RN7SKP282-201ENST00000516824 299 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 SNORA31.21-201ENST00000517180 77 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 AP006587.4-201ENST00000526053 529 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX1Q15475 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX1Q15475 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX1Q15475 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX1Q15475 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.62□□□□□ -1.99
SIX1Q15475 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.62□□□□□ -1.99
SIX1Q15475 AC146944.4-201ENST00000602697 718 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 AL022154.1-201ENST00000604698 785 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 AL137847.3-201ENST00000611521 109 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 AL390240.1-201ENST00000612950 384 ntBASIC2.62□□□□□ -1.99
SIX1Q15475 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.62□□□□□ -1.99
SIX1Q15475 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.62□□□□□ -1.99
SIX1Q15475 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.62□□□□□ -1.99
SIX1Q15475 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SIX1Q15475 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SIX1Q15475 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SIX1Q15475 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SIX1Q15475 AC073343.1-201ENST00000328239 651 ntBASIC2.61□□□□□ -1.99
SIX1Q15475 Y_RNA.296-201ENST00000364930 108 ntBASIC2.61□□□□□ -1.99
SIX1Q15475 SMIM11P1-201ENST00000369586 178 ntBASIC2.61□□□□□ -1.99
SIX1Q15475 RNU6-701P-201ENST00000384059 107 ntBASIC2.61□□□□□ -1.99
SIX1Q15475 RNU6-1103P-201ENST00000384150 107 ntBASIC2.61□□□□□ -1.99
SIX1Q15475 RNU6-1197P-201ENST00000391183 107 ntBASIC2.61□□□□□ -1.99
SIX1Q15475 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.61□□□□□ -1.99
SIX1Q15475 AL354719.1-201ENST00000406535 843 ntBASIC2.61□□□□□ -1.99
SIX1Q15475 MIR1289-1-201ENST00000408836 144 ntBASIC2.61□□□□□ -1.99
SIX1Q15475 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.61□□□□□ -1.99
SIX1Q15475 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.61□□□□□ -1.99
SIX1Q15475 MTND1P34-201ENST00000438556 671 ntBASIC2.61□□□□□ -1.99
SIX1Q15475 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.61□□□□□ -1.99
SIX1Q15475 AC009237.8-201ENST00000445492 379 ntBASIC2.61□□□□□ -1.99
SIX1Q15475 AC093392.2-201ENST00000450682 337 ntBASIC2.61□□□□□ -1.99
SIX1Q15475 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.61□□□□□ -1.99
SIX1Q15475 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.61□□□□□ -1.99
SIX1Q15475 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.61□□□□□ -1.99
SIX1Q15475 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.61□□□□□ -1.99
SIX1Q15475 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.61□□□□□ -1.99
SIX1Q15475 RPL30P5-201ENST00000494923 336 ntBASIC2.61□□□□□ -1.99
SIX1Q15475 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.61□□□□□ -1.99
SIX1Q15475 RNU6-410P-201ENST00000517006 107 ntBASIC2.61□□□□□ -1.99
SIX1Q15475 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
SIX1Q15475 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.61□□□□□ -1.99
SIX1Q15475 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms