Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AL021997.1-201ENST00000605757 193 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 AL158211.4-201ENST00000606988 584 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 AC004492.1-201ENST00000607036 742 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 AC098614.4-201ENST00000607601 462 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 AC107294.1-201ENST00000609524 467 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 TUG1_1.1-201ENST00000610654 145 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 AC091834.1-201ENST00000614543 472 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 AL161629.2-201ENST00000615347 275 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 MIR6130-201ENST00000619419 109 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 AC009268.2-201ENST00000621925 457 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 AC091953.2-201ENST00000623979 160 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CKAP4Q07065 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.34□□□□□ -2.03
CKAP4Q07065 MTND5P26-201ENST00000426018 1752 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 GNG5P1-201ENST00000255500 204 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 Y_RNA.3-201ENST00000362331 103 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 RNU6-1078P-201ENST00000364522 103 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 RNA5SP138-201ENST00000365098 114 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
CKAP4Q07065 RNU6-198P-201ENST00000384258 104 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 MIR670-201ENST00000390142 98 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.34□□□□□ -2.03
CKAP4Q07065 RPS4XP7-201ENST00000406274 780 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 RNU2-52P-201ENST00000410680 190 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 RNU6-193P-201ENST00000410977 107 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 CCDC58P2-201ENST00000417131 366 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 COTL1P1-201ENST00000422309 375 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.34□□□□□ -2.03
CKAP4Q07065 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.34□□□□□ -2.03
CKAP4Q07065 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.34□□□□□ -2.03
CKAP4Q07065 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.34□□□□□ -2.03
CKAP4Q07065 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.34□□□□□ -2.03
CKAP4Q07065 AC073614.1-201ENST00000438690 650 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 ELOCP30-201ENST00000447108 299 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 TPT1P14-201ENST00000448018 505 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.34□□□□□ -2.03
CKAP4Q07065 MTND1P12-201ENST00000455231 147 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.34□□□□□ -2.03
CKAP4Q07065 AC092798.1-201ENST00000458542 409 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.34□□□□□ -2.03
CKAP4Q07065 AC090096.1-201ENST00000489168 390 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CKAP4Q07065 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.34□□□□□ -2.03
CKAP4Q07065 AC234781.5-201ENST00000508429 271 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.34□□□□□ -2.03
CKAP4Q07065 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.34□□□□□ -2.03
CKAP4Q07065 RNU6-430P-201ENST00000517078 107 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 AC103783.1-201ENST00000520506 373 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 AP003392.2-201ENST00000527269 208 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.34□□□□□ -2.03
CKAP4Q07065 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.34□□□□□ -2.03
CKAP4Q07065 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.34□□□□□ -2.03
CKAP4Q07065 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.34□□□□□ -2.03
CKAP4Q07065 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.34□□□□□ -2.03
CKAP4Q07065 AC137800.2-201ENST00000574375 120 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 MIR3146-201ENST00000580367 79 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.34□□□□□ -2.03
CKAP4Q07065 NRBF2P1-201ENST00000587407 859 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 AC068790.3-201ENST00000602988 553 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 SRGNP1-201ENST00000603392 451 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 AC073648.5-201ENST00000603502 305 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 AL161729.4-201ENST00000604650 476 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 AC121334.2-201ENST00000605387 271 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.34□□□□□ -2.03
CKAP4Q07065 AC008498.1-201ENST00000613012 531 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 AC013476.2-201ENST00000614456 459 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 uc_338.12-201ENST00000616344 181 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 AC136475.10-201ENST00000620253 385 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 AC009831.4-201ENST00000620744 325 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 AL159972.1-201ENST00000625150 448 ntBASIC2.34□□□□□ -2.03
CKAP4Q07065 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.34□□□□□ -2.03
CKAP4Q07065 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.34□□□□□ -2.03
CKAP4Q07065 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.33□□□□□ -2.04
CKAP4Q07065 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.33□□□□□ -2.04
CKAP4Q07065 OR56A5-201ENST00000340110 738 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 RNU5A-8P-201ENST00000364102 114 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 RNU6-259P-201ENST00000383999 107 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 RPL23AP32-201ENST00000395315 459 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.33□□□□□ -2.04
CKAP4Q07065 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.33□□□□□ -2.04
CKAP4Q07065 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.33□□□□□ -2.04
CKAP4Q07065 MTCO1P21-201ENST00000416634 589 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 MTND3P17-201ENST00000416968 344 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 OR4K11P-201ENST00000431829 904 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.33□□□□□ -2.04
CKAP4Q07065 TIMM9P1-201ENST00000436122 256 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.33□□□□□ -2.04
CKAP4Q07065 RPL23AP7-203ENST00000449021 469 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 AL021397.1-201ENST00000451806 248 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 MTCO2P29-201ENST00000465212 189 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 RPL7P49-201ENST00000471402 708 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.33□□□□□ -2.04
CKAP4Q07065 RPS15AP34-201ENST00000487776 387 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 RPS27P26-201ENST00000494583 239 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CKAP4Q07065 RN7SKP132-201ENST00000516001 208 ntBASIC2.33□□□□□ -2.04
CKAP4Q07065 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.33□□□□□ -2.04
CKAP4Q07065 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.33□□□□□ -2.04
CKAP4Q07065 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms