Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 MIR34A-201ENST00000385130 110 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 MIR559-201ENST00000385188 96 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 RPL5P18-201ENST00000406671 891 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 MIR548P-201ENST00000408336 84 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 Y_RNA.594-201ENST00000410373 140 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 Z99755.1-201ENST00000414048 380 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.19□□□□□ -1.9
CFHR3Q02985 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.19□□□□□ -1.9
CFHR3Q02985 AL158071.1-201ENST00000430315 461 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 USP9YP30-201ENST00000430729 455 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.19□□□□□ -1.9
CFHR3Q02985 AC236972.1-201ENST00000433225 199 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.19□□□□□ -1.9
CFHR3Q02985 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.19□□□□□ -1.9
CFHR3Q02985 HLA-N-201ENST00000437516 135 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.19□□□□□ -1.9
CFHR3Q02985 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.19□□□□□ -1.9
CFHR3Q02985 ELOCP24-201ENST00000456370 334 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 AC084357.1-201ENST00000473404 255 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 AC006517.1-201ENST00000480485 328 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.19□□□□□ -1.9
CFHR3Q02985 AC025445.1-201ENST00000502728 300 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 AC108043.1-201ENST00000512696 574 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.19□□□□□ -1.9
CFHR3Q02985 RNU1-103P-201ENST00000516502 125 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 RNU6-928P-201ENST00000516876 104 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CFHR3Q02985 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.19□□□□□ -1.9
CFHR3Q02985 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.19□□□□□ -1.9
CFHR3Q02985 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.19□□□□□ -1.9
CFHR3Q02985 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.19□□□□□ -1.9
CFHR3Q02985 H3F3AP1-201ENST00000559984 334 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 MIR4782-201ENST00000577987 79 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 MIR3171-201ENST00000584270 74 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 AC022432.1-201ENST00000595739 310 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 AL121917.1-203ENST00000605534 577 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 AC133104.2-201ENST00000615272 193 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CFHR3Q02985 Z69720.2-201ENST00000624755 279 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CFHR3Q02985 RLIMP1-201ENST00000339626 1680 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
CFHR3Q02985 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.19□□□□□ -1.9
CFHR3Q02985 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CFHR3Q02985 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CFHR3Q02985 CUL1P1-201ENST00000509510 2425 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 MTND5P10-201ENST00000603719 1809 ntBASIC3.19□□□□□ -1.9
CFHR3Q02985 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.18□□□□□ -1.9
CFHR3Q02985 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.18□□□□□ -1.9
CFHR3Q02985 MTND5P19-201ENST00000424872 1794 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CFHR3Q02985 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CFHR3Q02985 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.18□□□□□ -1.9
CFHR3Q02985 RNU6-884P-201ENST00000363889 107 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 Y_RNA.404-201ENST00000383978 102 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 Y_RNA.445-201ENST00000384168 102 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 RNU6-658P-201ENST00000384606 106 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 snosnR66.1-201ENST00000391095 99 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 RPL21P65-201ENST00000406094 466 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.18□□□□□ -1.9
CFHR3Q02985 RNA5SP104-201ENST00000410989 118 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 SNORD56-201ENST00000413522 71 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.18□□□□□ -1.9
CFHR3Q02985 RPL17P36-201ENST00000420302 549 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 AL117339.2-201ENST00000430475 180 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.18□□□□□ -1.9
CFHR3Q02985 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.18□□□□□ -1.9
CFHR3Q02985 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.18□□□□□ -1.9
CFHR3Q02985 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CFHR3Q02985 AL451050.1-201ENST00000450126 415 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 PCMTD1P1-201ENST00000455560 355 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 Y_RNA.631-201ENST00000459607 101 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 RN7SL585P-201ENST00000470538 280 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.18□□□□□ -1.9
CFHR3Q02985 AC097473.1-201ENST00000508142 408 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.18□□□□□ -1.9
CFHR3Q02985 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.18□□□□□ -1.9
CFHR3Q02985 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.18□□□□□ -1.9
CFHR3Q02985 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.18□□□□□ -1.9
CFHR3Q02985 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.18□□□□□ -1.9
CFHR3Q02985 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.18□□□□□ -1.9
CFHR3Q02985 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CFHR3Q02985 ZNF807-201ENST00000328088 1707 ntBASIC3.18□□□□□ -1.9
CFHR3Q02985 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CFHR3Q02985 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
CFHR3Q02985 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.18□□□□□ -1.9
CFHR3Q02985 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CFHR3Q02985 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CFHR3Q02985 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
CFHR3Q02985 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
CFHR3Q02985 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CFHR3Q02985 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CFHR3Q02985 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.17□□□□□ -1.9
CFHR3Q02985 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.17□□□□□ -1.9
CFHR3Q02985 AC011266.1-201ENST00000624119 3569 ntBASIC3.17□□□□□ -1.9
CFHR3Q02985 RNU6-1059P-201ENST00000363752 98 ntBASIC3.17□□□□□ -1.9
CFHR3Q02985 Y_RNA.197-201ENST00000364004 102 ntBASIC3.17□□□□□ -1.9
CFHR3Q02985 Y_RNA.216-201ENST00000364205 93 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms