Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC116563.2-201ENST00000624751 535 ntBASIC-0.03□□□□□ -2.41
RPL39P62891 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC-0.03□□□□□ -2.41
RPL39P62891 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC-0.03□□□□□ -2.41
RPL39P62891 AC016716.1-201ENST00000265882 708 ntBASIC-0.04□□□□□ -2.42
RPL39P62891 MIR1295A-201ENST00000408463 79 ntBASIC-0.04□□□□□ -2.42
RPL39P62891 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC-0.04□□□□□ -2.42
RPL39P62891 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC-0.04□□□□□ -2.42
RPL39P62891 RSU1P2-202ENST00000437884 485 ntBASIC-0.04□□□□□ -2.42
RPL39P62891 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC-0.04□□□□□ -2.42
RPL39P62891 TAF9P1-201ENST00000445421 515 ntBASIC-0.04□□□□□ -2.42
RPL39P62891 TAF9P2-201ENST00000454958 515 ntBASIC-0.04□□□□□ -2.42
RPL39P62891 AL359385.1-201ENST00000456509 365 ntBASIC-0.04□□□□□ -2.42
RPL39P62891 AC112492.4-201ENST00000456549 352 ntBASIC-0.04□□□□□ -2.42
RPL39P62891 AC006512.1-201ENST00000468816 291 ntBASIC-0.04□□□□□ -2.42
RPL39P62891 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC-0.04□□□□□ -2.42
RPL39P62891 IGKV2D-36-201ENST00000518643 226 ntBASIC-0.04□□□□□ -2.42
RPL39P62891 AC107953.1-201ENST00000522216 297 ntBASIC-0.04□□□□□ -2.42
RPL39P62891 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC-0.04□□□□□ -2.42
RPL39P62891 AC105224.1-201ENST00000587055 421 ntBASIC-0.04□□□□□ -2.42
RPL39P62891 AL669831.4-202ENST00000590817 238 ntBASIC-0.04□□□□□ -2.42
RPL39P62891 MTCYBP22-201ENST00000603788 447 ntBASIC-0.04□□□□□ -2.42
RPL39P62891 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
RPL39P62891 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
RPL39P62891 MIR518A2-201ENST00000384966 87 ntBASIC-0.05□□□□□ -2.42
RPL39P62891 AL669831.1-202ENST00000428504 417 ntBASIC-0.05□□□□□ -2.42
RPL39P62891 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC-0.05□□□□□ -2.42
RPL39P62891 GTF2IP13-201ENST00000438487 386 ntBASIC-0.05□□□□□ -2.42
RPL39P62891 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC-0.05□□□□□ -2.42
RPL39P62891 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC-0.05□□□□□ -2.42
RPL39P62891 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.05□□□□□ -2.42
RPL39P62891 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC-0.05□□□□□ -2.42
RPL39P62891 RN7SKP96-201ENST00000516948 297 ntBASIC-0.05□□□□□ -2.42
RPL39P62891 RNU6-1223P-201ENST00000517124 104 ntBASIC-0.05□□□□□ -2.42
RPL39P62891 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC-0.05□□□□□ -2.42
RPL39P62891 AC136619.2-201ENST00000563361 631 ntBASIC-0.05□□□□□ -2.42
RPL39P62891 AC073544.2-201ENST00000601155 540 ntBASIC-0.05□□□□□ -2.42
RPL39P62891 AC069114.2-201ENST00000604699 304 ntBASIC-0.05□□□□□ -2.42
RPL39P62891 AC139769.3-201ENST00000618383 175 ntBASIC-0.05□□□□□ -2.42
RPL39P62891 AL359757.2-201ENST00000624309 274 ntBASIC-0.05□□□□□ -2.42
RPL39P62891 RNU6-271P-201ENST00000363858 105 ntBASIC-0.06□□□□□ -2.42
RPL39P62891 RNA5SP105-201ENST00000391123 113 ntBASIC-0.06□□□□□ -2.42
RPL39P62891 ATP5F1P6-201ENST00000402768 767 ntBASIC-0.06□□□□□ -2.42
RPL39P62891 RNU2-36P-201ENST00000410361 191 ntBASIC-0.06□□□□□ -2.42
RPL39P62891 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.06□□□□□ -2.42
RPL39P62891 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC-0.06□□□□□ -2.42
RPL39P62891 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC-0.06□□□□□ -2.42
RPL39P62891 AC023347.2-201ENST00000433994 462 ntBASIC-0.06□□□□□ -2.42
RPL39P62891 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC-0.06□□□□□ -2.42
RPL39P62891 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC-0.06□□□□□ -2.42
RPL39P62891 AP001025.1-201ENST00000486139 332 ntBASIC-0.06□□□□□ -2.42
RPL39P62891 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC-0.06□□□□□ -2.42
RPL39P62891 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC-0.06□□□□□ -2.42
RPL39P62891 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC-0.06□□□□□ -2.42
RPL39P62891 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC-0.06□□□□□ -2.42
RPL39P62891 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC-0.06□□□□□ -2.42
RPL39P62891 MIR6130-201ENST00000619419 109 ntBASIC-0.06□□□□□ -2.42
RPL39P62891 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
RPL39P62891 AL589743.1-201ENST00000551932 2712 ntBASIC-0.06□□□□□ -2.42
RPL39P62891 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
RPL39P62891 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
RPL39P62891 RNU6-110P-201ENST00000384508 104 ntBASIC-0.07□□□□□ -2.42
RPL39P62891 SNORA40.19-201ENST00000390846 128 ntBASIC-0.07□□□□□ -2.42
RPL39P62891 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC-0.07□□□□□ -2.42
RPL39P62891 RPS27P16-201ENST00000425758 201 ntBASIC-0.07□□□□□ -2.42
RPL39P62891 ELOCP11-201ENST00000436690 332 ntBASIC-0.07□□□□□ -2.42
RPL39P62891 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC-0.07□□□□□ -2.42
RPL39P62891 ELOCP16-201ENST00000444494 332 ntBASIC-0.07□□□□□ -2.42
RPL39P62891 snoU13.9-201ENST00000458927 103 ntBASIC-0.07□□□□□ -2.42
RPL39P62891 RPS26P55-201ENST00000471178 356 ntBASIC-0.07□□□□□ -2.42
RPL39P62891 NTS-203ENST00000551529 801 ntTSL 3 BASIC-0.07□□□□□ -2.42
RPL39P62891 AL022345.2-201ENST00000606307 135 ntBASIC-0.07□□□□□ -2.42
RPL39P62891 AC040896.1-201ENST00000613819 479 ntBASIC-0.07□□□□□ -2.42
RPL39P62891 AL078604.3-201ENST00000615580 211 ntBASIC-0.07□□□□□ -2.42
RPL39P62891 AC099842.1-201ENST00000619919 596 ntBASIC-0.07□□□□□ -2.42
RPL39P62891 ZNF680P1-201ENST00000436625 1469 ntBASIC-0.08□□□□□ -2.42
RPL39P62891 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
RPL39P62891 MIR518D-201ENST00000385014 87 ntBASIC-0.08□□□□□ -2.42
RPL39P62891 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC-0.08□□□□□ -2.42
RPL39P62891 RPS3AP37-201ENST00000419176 745 ntBASIC-0.08□□□□□ -2.42
RPL39P62891 RPEP5-201ENST00000441137 268 ntBASIC-0.08□□□□□ -2.42
RPL39P62891 snoU109.4-201ENST00000458953 143 ntBASIC-0.08□□□□□ -2.42
RPL39P62891 RNA5SP57-201ENST00000459463 123 ntBASIC-0.08□□□□□ -2.42
RPL39P62891 RNU6-237P-201ENST00000515985 71 ntBASIC-0.08□□□□□ -2.42
RPL39P62891 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC-0.08□□□□□ -2.42
RPL39P62891 AC005832.3-201ENST00000537929 631 ntBASIC-0.08□□□□□ -2.42
RPL39P62891 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC-0.08□□□□□ -2.42
RPL39P62891 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC-0.08□□□□□ -2.42
RPL39P62891 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC-0.08□□□□□ -2.42
RPL39P62891 AC093913.1-201ENST00000614178 329 ntBASIC-0.08□□□□□ -2.42
RPL39P62891 AL391597.1-201ENST00000618707 694 ntBASIC-0.08□□□□□ -2.42
RPL39P62891 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC-0.08□□□□□ -2.42
RPL39P62891 OR4G3P-201ENST00000633500 913 ntBASIC-0.08□□□□□ -2.42
RPL39P62891 AC096656.1-201ENST00000623826 1364 ntBASIC-0.08□□□□□ -2.42
RPL39P62891 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
RPL39P62891 RNU6-37P-201ENST00000362692 107 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 RNU6-11P-201ENST00000364234 107 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC-0.09□□□□□ -2.42
RPL39P62891 RNU6-1-201ENST00000383898 107 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 RNU6-42P-201ENST00000384165 107 ntBASIC-0.09□□□□□ -2.42
RPL39P62891 RNU6-36P-201ENST00000384172 107 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms