Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AL157770.1-201ENST00000623049 439 ntBASIC1.33□□□□□ -2.2
CDC42P60953 AC079416.3-201ENST00000624479 549 ntBASIC1.33□□□□□ -2.2
CDC42P60953 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42P60953 Y_RNA.245-201ENST00000364493 95 ntBASIC1.32□□□□□ -2.2
CDC42P60953 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42P60953 RNU6-754P-201ENST00000391166 107 ntBASIC1.32□□□□□ -2.2
CDC42P60953 TXNP7-201ENST00000406296 293 ntBASIC1.32□□□□□ -2.2
CDC42P60953 AL358453.1-201ENST00000422522 250 ntBASIC1.32□□□□□ -2.2
CDC42P60953 DPRXP1-201ENST00000426312 460 ntBASIC1.32□□□□□ -2.2
CDC42P60953 SEPT7P5-201ENST00000434048 306 ntBASIC1.32□□□□□ -2.2
CDC42P60953 USP9YP22-201ENST00000438971 294 ntBASIC1.32□□□□□ -2.2
CDC42P60953 PTGES3P1-201ENST00000439531 483 ntBASIC1.32□□□□□ -2.2
CDC42P60953 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42P60953 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42P60953 MTND2P30-201ENST00000456663 382 ntBASIC1.32□□□□□ -2.2
CDC42P60953 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42P60953 AC013267.1-201ENST00000458227 267 ntBASIC1.32□□□□□ -2.2
CDC42P60953 RN7SL429P-201ENST00000479090 223 ntBASIC1.32□□□□□ -2.2
CDC42P60953 RN7SL489P-201ENST00000486185 223 ntBASIC1.32□□□□□ -2.2
CDC42P60953 RN7SL327P-201ENST00000488659 223 ntBASIC1.32□□□□□ -2.2
CDC42P60953 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42P60953 AC116337.1-201ENST00000509680 687 ntBASIC1.32□□□□□ -2.2
CDC42P60953 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42P60953 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42P60953 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.32□□□□□ -2.2
CDC42P60953 ARL2BPP2-201ENST00000550907 489 ntBASIC1.32□□□□□ -2.2
CDC42P60953 DUXAP1-201ENST00000556632 463 ntBASIC1.32□□□□□ -2.2
CDC42P60953 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42P60953 LINC00557-201ENST00000563184 1279 ntBASIC1.32□□□□□ -2.2
CDC42P60953 AP001542.1-201ENST00000591314 200 ntBASIC1.32□□□□□ -2.2
CDC42P60953 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.32□□□□□ -2.2
CDC42P60953 AL158827.2-201ENST00000602494 330 ntBASIC1.32□□□□□ -2.2
CDC42P60953 AC005332.6-201ENST00000613178 446 ntBASIC1.32□□□□□ -2.2
CDC42P60953 AC011939.3-201ENST00000613686 466 ntBASIC1.32□□□□□ -2.2
CDC42P60953 MIR8084-201ENST00000614105 89 ntBASIC1.32□□□□□ -2.2
CDC42P60953 RN7SL853P-201ENST00000617250 223 ntBASIC1.32□□□□□ -2.2
CDC42P60953 AC009268.2-201ENST00000621925 457 ntBASIC1.32□□□□□ -2.2
CDC42P60953 AC120349.2-201ENST00000625002 298 ntBASIC1.32□□□□□ -2.2
CDC42P60953 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42P60953 AL691447.3-201ENST00000635020 330 ntBASIC1.32□□□□□ -2.2
CDC42P60953 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.32□□□□□ -2.2
CDC42P60953 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.32□□□□□ -2.2
CDC42P60953 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
CDC42P60953 MIR504-201ENST00000385065 83 ntBASIC1.31□□□□□ -2.2
CDC42P60953 BTF3P8-201ENST00000414577 526 ntBASIC1.31□□□□□ -2.2
CDC42P60953 SDAD1P3-201ENST00000427380 333 ntBASIC1.31□□□□□ -2.2
CDC42P60953 MTND1P28-201ENST00000435623 950 ntBASIC1.31□□□□□ -2.2
CDC42P60953 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.31□□□□□ -2.2
CDC42P60953 CYP2C59P-201ENST00000457790 269 ntBASIC1.31□□□□□ -2.2
CDC42P60953 AP001324.2-201ENST00000461163 319 ntBASIC1.31□□□□□ -2.2
CDC42P60953 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.31□□□□□ -2.2
CDC42P60953 FAM206BP-201ENST00000510179 541 ntBASIC1.31□□□□□ -2.2
CDC42P60953 RNA5SP61-201ENST00000516453 100 ntBASIC1.31□□□□□ -2.2
CDC42P60953 RNU6-714P-201ENST00000516963 103 ntBASIC1.31□□□□□ -2.2
CDC42P60953 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.31□□□□□ -2.2
CDC42P60953 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.31□□□□□ -2.2
CDC42P60953 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.31□□□□□ -2.2
CDC42P60953 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CDC42P60953 MTCO2P15-201ENST00000532655 656 ntBASIC1.31□□□□□ -2.2
CDC42P60953 AC027807.1-201ENST00000559921 996 ntBASIC1.31□□□□□ -2.2
CDC42P60953 AC233702.2-202ENST00000562547 291 ntBASIC1.31□□□□□ -2.2
CDC42P60953 MTCYBP22-201ENST00000603788 447 ntBASIC1.31□□□□□ -2.2
CDC42P60953 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42P60953 AL357080.1-201ENST00000617394 239 ntBASIC1.31□□□□□ -2.2
CDC42P60953 AC097460.3-201ENST00000623099 442 ntBASIC1.31□□□□□ -2.2
CDC42P60953 AC019226.1-201ENST00000625666 515 ntBASIC1.31□□□□□ -2.2
CDC42P60953 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.31□□□□□ -2.2
CDC42P60953 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.3□□□□□ -2.2
CDC42P60953 RNU6-748P-201ENST00000384648 107 ntBASIC1.3□□□□□ -2.2
CDC42P60953 SNORA40.19-201ENST00000390846 128 ntBASIC1.3□□□□□ -2.2
CDC42P60953 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
CDC42P60953 MTND1P21-201ENST00000412991 285 ntBASIC1.3□□□□□ -2.2
CDC42P60953 TPMTP2-201ENST00000414372 726 ntBASIC1.3□□□□□ -2.2
CDC42P60953 AL513185.2-201ENST00000425543 193 ntBASIC1.3□□□□□ -2.2
CDC42P60953 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC42P60953 HMGB1P18-201ENST00000438801 619 ntBASIC1.3□□□□□ -2.2
CDC42P60953 MTND2P3-201ENST00000452458 470 ntBASIC1.3□□□□□ -2.2
CDC42P60953 CECR9-201ENST00000453421 199 ntBASIC1.3□□□□□ -2.2
CDC42P60953 AC244505.3-201ENST00000454598 187 ntBASIC1.3□□□□□ -2.2
CDC42P60953 TPRKBP1-201ENST00000456243 481 ntBASIC1.3□□□□□ -2.2
CDC42P60953 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC42P60953 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.3□□□□□ -2.2
CDC42P60953 AC117503.1-201ENST00000472241 394 ntBASIC1.3□□□□□ -2.2
CDC42P60953 CKS1BP2-201ENST00000497342 240 ntBASIC1.3□□□□□ -2.2
CDC42P60953 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.3□□□□□ -2.2
CDC42P60953 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.3□□□□□ -2.2
CDC42P60953 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC42P60953 AC122134.1-202ENST00000569111 1201 ntBASIC1.3□□□□□ -2.2
CDC42P60953 MIR3198-2-201ENST00000577868 80 ntBASIC1.3□□□□□ -2.2
CDC42P60953 SNORD53B-201ENST00000577887 78 ntBASIC1.3□□□□□ -2.2
CDC42P60953 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.3□□□□□ -2.2
CDC42P60953 AC016925.2-201ENST00000605108 242 ntBASIC1.3□□□□□ -2.2
CDC42P60953 AC243773.3-201ENST00000613270 256 ntBASIC1.3□□□□□ -2.2
CDC42P60953 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.3□□□□□ -2.2
CDC42P60953 AC091304.6-201ENST00000619761 202 ntBASIC1.3□□□□□ -2.2
CDC42P60953 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.3□□□□□ -2.2
CDC42P60953 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC42P60953 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
CDC42P60953 AC107982.1-201ENST00000507171 1300 ntBASIC1.3□□□□□ -2.2
CDC42P60953 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms