Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 RNU6-953P-201ENST00000459154 107 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 AC018437.1-201ENST00000492214 406 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 AC104164.2-201ENST00000496953 495 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 HMGB1P35-201ENST00000503360 598 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 NDUFB4P9-201ENST00000511646 388 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 CBX3P8-201ENST00000532412 525 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ERVFC1P60507 MIR5692A1-201ENST00000580523 69 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 MIR3944-201ENST00000581277 108 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 AC005255.1-201ENST00000593748 216 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 AC064801.1-201ENST00000612025 407 ntBASIC4.4□□□□□ -1.71
ERVFC1P60507 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ERVFC1P60507 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.4□□□□□ -1.71
ERVFC1P60507 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
ERVFC1P60507 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ERVFC1P60507 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.71
ERVFC1P60507 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ERVFC1P60507 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ERVFC1P60507 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
ERVFC1P60507 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.4□□□□□ -1.71
ERVFC1P60507 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ERVFC1P60507 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ERVFC1P60507 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.39□□□□□ -1.71
ERVFC1P60507 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
ERVFC1P60507 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
ERVFC1P60507 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.39□□□□□ -1.71
ERVFC1P60507 MIR335-201ENST00000362173 94 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 Y_RNA.29-201ENST00000362570 113 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 RNU6-212P-201ENST00000362642 104 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 Y_RNA.183-201ENST00000363882 113 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 RNU6-1303P-201ENST00000364841 107 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.39□□□□□ -1.71
ERVFC1P60507 Y_RNA.462-201ENST00000384268 102 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 SNORA51.11-201ENST00000384442 131 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 Y_RNA.539-201ENST00000384635 107 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 AC099677.1-201ENST00000420575 175 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.39□□□□□ -1.71
ERVFC1P60507 AC104332.1-201ENST00000440471 797 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 AC006011.1-201ENST00000442758 349 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 AC005798.1-201ENST00000513715 387 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 RN7SKP82-201ENST00000516786 223 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 RN7SKP258-201ENST00000517151 304 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 AC034114.1-201ENST00000520293 285 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.39□□□□□ -1.71
ERVFC1P60507 AC067852.4-201ENST00000590314 478 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 AL390123.1-201ENST00000603216 237 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 RNU6-85P-201ENST00000605989 107 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 AC005344.1-201ENST00000613391 459 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 MIR4275-201ENST00000636486 87 ntBASIC4.39□□□□□ -1.71
ERVFC1P60507 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
ERVFC1P60507 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ERVFC1P60507 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ERVFC1P60507 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
ERVFC1P60507 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
ERVFC1P60507 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
ERVFC1P60507 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
ERVFC1P60507 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ERVFC1P60507 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.38□□□□□ -1.71
ERVFC1P60507 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
ERVFC1P60507 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
ERVFC1P60507 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.38□□□□□ -1.71
ERVFC1P60507 SNORA63.1-201ENST00000362493 131 ntBASIC4.38□□□□□ -1.71
ERVFC1P60507 RNU6-989P-201ENST00000362756 107 ntBASIC4.38□□□□□ -1.71
ERVFC1P60507 RNU1-44P-201ENST00000384453 163 ntBASIC4.38□□□□□ -1.71
ERVFC1P60507 RNU2-14P-201ENST00000411053 191 ntBASIC4.38□□□□□ -1.71
ERVFC1P60507 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ERVFC1P60507 UBE2D3P2-201ENST00000424409 445 ntBASIC4.38□□□□□ -1.71
ERVFC1P60507 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.38□□□□□ -1.71
ERVFC1P60507 RPS3AP46-201ENST00000448352 682 ntBASIC4.38□□□□□ -1.71
ERVFC1P60507 NDUFS5P3-201ENST00000450668 321 ntBASIC4.38□□□□□ -1.71
ERVFC1P60507 AC026726.1-201ENST00000512859 601 ntBASIC4.38□□□□□ -1.71
ERVFC1P60507 ACA59.1-201ENST00000515966 143 ntBASIC4.38□□□□□ -1.71
ERVFC1P60507 RNU6-570P-201ENST00000517051 105 ntBASIC4.38□□□□□ -1.71
ERVFC1P60507 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.38□□□□□ -1.71
ERVFC1P60507 AC104576.1-201ENST00000524225 88 ntBASIC4.38□□□□□ -1.71
ERVFC1P60507 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.38□□□□□ -1.71
ERVFC1P60507 MIR3910-1-201ENST00000580936 111 ntBASIC4.38□□□□□ -1.71
ERVFC1P60507 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.38□□□□□ -1.71
ERVFC1P60507 SNORA51-201ENST00000606420 132 ntBASIC4.38□□□□□ -1.71
ERVFC1P60507 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.38□□□□□ -1.71
ERVFC1P60507 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ERVFC1P60507 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.38□□□□□ -1.71
ERVFC1P60507 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
ERVFC1P60507 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.38□□□□□ -1.71
ERVFC1P60507 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.37□□□□□ -1.71
ERVFC1P60507 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERVFC1P60507 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERVFC1P60507 RNY3P11-201ENST00000364153 102 ntBASIC4.37□□□□□ -1.71
ERVFC1P60507 RNU6-338P-201ENST00000383888 105 ntBASIC4.37□□□□□ -1.71
ERVFC1P60507 MIR548I2-201ENST00000408348 149 ntBASIC4.37□□□□□ -1.71
ERVFC1P60507 RNA5SP146-201ENST00000410743 123 ntBASIC4.37□□□□□ -1.71
ERVFC1P60507 RN7SKP167-201ENST00000411047 285 ntBASIC4.37□□□□□ -1.71
ERVFC1P60507 RPL21P90-201ENST00000415692 466 ntBASIC4.37□□□□□ -1.71
ERVFC1P60507 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.37□□□□□ -1.71
ERVFC1P60507 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ERVFC1P60507 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.37□□□□□ -1.71
ERVFC1P60507 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.37□□□□□ -1.71
ERVFC1P60507 SNORA31.6-201ENST00000516241 130 ntBASIC4.37□□□□□ -1.71
ERVFC1P60507 Y_RNA.687-201ENST00000516558 91 ntBASIC4.37□□□□□ -1.71
ERVFC1P60507 RN7SKP277-201ENST00000516895 283 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms