Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.97□□□□□ -2.09
CLDN6P56747 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.97□□□□□ -2.09
CLDN6P56747 AC004908.2-201ENST00000609090 574 ntBASIC1.97□□□□□ -2.09
CLDN6P56747 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CLDN6P56747 DUSP12P1-201ENST00000612874 516 ntBASIC1.97□□□□□ -2.09
CLDN6P56747 YWHAEP7-203ENST00000622054 312 ntBASIC1.97□□□□□ -2.09
CLDN6P56747 AP000676.3-201ENST00000623299 569 ntBASIC1.97□□□□□ -2.09
CLDN6P56747 AC106858.1-201ENST00000637497 429 ntBASIC1.97□□□□□ -2.09
CLDN6P56747 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CLDN6P56747 MIR147B-201ENST00000390185 80 ntBASIC1.96□□□□□ -2.1
CLDN6P56747 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CLDN6P56747 FGF7P8-201ENST00000402994 292 ntBASIC1.96□□□□□ -2.1
CLDN6P56747 MIR1287-201ENST00000408492 90 ntBASIC1.96□□□□□ -2.1
CLDN6P56747 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.96□□□□□ -2.1
CLDN6P56747 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.96□□□□□ -2.1
CLDN6P56747 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.96□□□□□ -2.1
CLDN6P56747 AL445685.2-201ENST00000422551 342 ntBASIC1.96□□□□□ -2.1
CLDN6P56747 AC027124.2-201ENST00000428249 105 ntBASIC1.96□□□□□ -2.1
CLDN6P56747 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.96□□□□□ -2.1
CLDN6P56747 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.96□□□□□ -2.1
CLDN6P56747 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.96□□□□□ -2.1
CLDN6P56747 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.96□□□□□ -2.1
CLDN6P56747 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.96□□□□□ -2.1
CLDN6P56747 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.96□□□□□ -2.1
CLDN6P56747 AC132942.1-201ENST00000486753 483 ntBASIC1.96□□□□□ -2.1
CLDN6P56747 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CLDN6P56747 AC096571.1-202ENST00000506634 735 ntBASIC1.96□□□□□ -2.1
CLDN6P56747 AC021146.8-201ENST00000507455 733 ntBASIC1.96□□□□□ -2.1
CLDN6P56747 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.96□□□□□ -2.1
CLDN6P56747 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.96□□□□□ -2.1
CLDN6P56747 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.96□□□□□ -2.1
CLDN6P56747 MRPS36P5-201ENST00000551909 298 ntBASIC1.96□□□□□ -2.1
CLDN6P56747 AL133241.1-201ENST00000556832 487 ntBASIC1.96□□□□□ -2.1
CLDN6P56747 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.96□□□□□ -2.1
CLDN6P56747 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.96□□□□□ -2.1
CLDN6P56747 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.96□□□□□ -2.1
CLDN6P56747 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.96□□□□□ -2.1
CLDN6P56747 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CLDN6P56747 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.96□□□□□ -2.1
CLDN6P56747 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CLDN6P56747 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.95□□□□□ -2.1
CLDN6P56747 CKAP2P1-201ENST00000555477 2049 ntBASIC1.95□□□□□ -2.1
CLDN6P56747 AL359854.1-201ENST00000614203 1594 ntBASIC1.95□□□□□ -2.1
CLDN6P56747 RNU6-457P-201ENST00000363999 107 ntBASIC1.95□□□□□ -2.1
CLDN6P56747 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CLDN6P56747 AL021407.1-201ENST00000404531 386 ntBASIC1.95□□□□□ -2.1
CLDN6P56747 SNORD23.1-201ENST00000408212 104 ntBASIC1.95□□□□□ -2.1
CLDN6P56747 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.95□□□□□ -2.1
CLDN6P56747 AL031659.1-201ENST00000447075 539 ntBASIC1.95□□□□□ -2.1
CLDN6P56747 RPL21P134-201ENST00000453468 483 ntBASIC1.95□□□□□ -2.1
CLDN6P56747 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.95□□□□□ -2.1
CLDN6P56747 AC005410.1-202ENST00000460347 485 ntBASIC1.95□□□□□ -2.1
CLDN6P56747 AC004263.1-201ENST00000479327 332 ntBASIC1.95□□□□□ -2.1
CLDN6P56747 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.95□□□□□ -2.1
CLDN6P56747 AC068781.1-201ENST00000488231 618 ntBASIC1.95□□□□□ -2.1
CLDN6P56747 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.95□□□□□ -2.1
CLDN6P56747 RN7SKP258-201ENST00000517151 304 ntBASIC1.95□□□□□ -2.1
CLDN6P56747 AL121821.2-201ENST00000556081 394 ntBASIC1.95□□□□□ -2.1
CLDN6P56747 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.95□□□□□ -2.1
CLDN6P56747 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.95□□□□□ -2.1
CLDN6P56747 AC091152.3-201ENST00000604227 325 ntBASIC1.95□□□□□ -2.1
CLDN6P56747 MIR8081-201ENST00000611533 95 ntBASIC1.95□□□□□ -2.1
CLDN6P56747 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.95□□□□□ -2.1
CLDN6P56747 AC013437.2-201ENST00000639587 677 ntBASIC1.95□□□□□ -2.1
CLDN6P56747 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.95□□□□□ -2.1
CLDN6P56747 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.95□□□□□ -2.1
CLDN6P56747 AL596028.1-201ENST00000326971 197 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 Y_RNA.192-201ENST00000363977 102 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 RNU6-512P-201ENST00000364438 103 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 RNU6-19P-201ENST00000384718 107 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 MIR19A-201ENST00000384878 82 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CLDN6P56747 AL139397.2-201ENST00000404529 772 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 AL359634.1-202ENST00000404721 284 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 AL136310.1-201ENST00000404926 654 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 RNU6-1140P-201ENST00000410517 106 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 AL359704.1-201ENST00000411586 781 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN6P56747 AC083875.1-201ENST00000419509 405 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN6P56747 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN6P56747 WARS2P1-201ENST00000429678 537 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN6P56747 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.94□□□□□ -2.1
CLDN6P56747 AC124916.1-201ENST00000444020 547 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 MTCO1P27-201ENST00000448269 226 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 FABP5P15-201ENST00000453566 214 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN6P56747 SNORD13-201ENST00000459299 104 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 AC104982.1-201ENST00000478775 574 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.94□□□□□ -2.1
CLDN6P56747 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.94□□□□□ -2.1
CLDN6P56747 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN6P56747 RNA5SP112-201ENST00000515937 99 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 RNU7-193P-201ENST00000516723 65 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.94□□□□□ -2.1
CLDN6P56747 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN6P56747 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.94□□□□□ -2.1
CLDN6P56747 CBX3P7-201ENST00000532876 502 ntBASIC1.94□□□□□ -2.1
CLDN6P56747 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms