Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC005609.4-201ENST00000625071 447 ntBASIC2.88□□□□□ -1.95
CDH13P55290 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDH13P55290 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDH13P55290 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CDH13P55290 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.87□□□□□ -1.95
CDH13P55290 ZNF519P1-201ENST00000449011 1626 ntBASIC2.87□□□□□ -1.95
CDH13P55290 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CDH13P55290 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.87□□□□□ -1.95
CDH13P55290 SNORA63.1-201ENST00000362493 131 ntBASIC2.87□□□□□ -1.95
CDH13P55290 Y_RNA.33-201ENST00000362591 102 ntBASIC2.87□□□□□ -1.95
CDH13P55290 Y_RNA.296-201ENST00000364930 108 ntBASIC2.87□□□□□ -1.95
CDH13P55290 SNORD115-7-201ENST00000365306 82 ntBASIC2.87□□□□□ -1.95
CDH13P55290 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDH13P55290 MIR181B1-201ENST00000385240 110 ntBASIC2.87□□□□□ -1.95
CDH13P55290 MIR767-201ENST00000390228 109 ntBASIC2.87□□□□□ -1.95
CDH13P55290 MIR887-201ENST00000401258 79 ntBASIC2.87□□□□□ -1.95
CDH13P55290 MIR1289-1-201ENST00000408836 144 ntBASIC2.87□□□□□ -1.95
CDH13P55290 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH13P55290 MTATP6P18-201ENST00000417994 673 ntBASIC2.87□□□□□ -1.95
CDH13P55290 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH13P55290 AL160275.3-201ENST00000423876 471 ntBASIC2.87□□□□□ -1.95
CDH13P55290 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.87□□□□□ -1.95
CDH13P55290 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDH13P55290 AC073464.1-201ENST00000429823 534 ntBASIC2.87□□□□□ -1.95
CDH13P55290 USP9YP14-201ENST00000430663 563 ntBASIC2.87□□□□□ -1.95
CDH13P55290 GTF2IP20-201ENST00000431663 360 ntBASIC2.87□□□□□ -1.95
CDH13P55290 RPS15AP5-201ENST00000436276 388 ntBASIC2.87□□□□□ -1.95
CDH13P55290 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH13P55290 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.87□□□□□ -1.95
CDH13P55290 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH13P55290 RN7SL601P-201ENST00000471221 293 ntBASIC2.87□□□□□ -1.95
CDH13P55290 RPL7P49-201ENST00000471402 708 ntBASIC2.87□□□□□ -1.95
CDH13P55290 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.87□□□□□ -1.95
CDH13P55290 RAC1P5-201ENST00000512182 576 ntBASIC2.87□□□□□ -1.95
CDH13P55290 AC008885.1-201ENST00000514930 301 ntBASIC2.87□□□□□ -1.95
CDH13P55290 PSMA2P1-201ENST00000526365 646 ntBASIC2.87□□□□□ -1.95
CDH13P55290 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDH13P55290 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDH13P55290 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.87□□□□□ -1.95
CDH13P55290 AC009063.1-201ENST00000563342 702 ntBASIC2.87□□□□□ -1.95
CDH13P55290 MIR4775-201ENST00000581168 75 ntBASIC2.87□□□□□ -1.95
CDH13P55290 AC005498.1-201ENST00000592125 465 ntBASIC2.87□□□□□ -1.95
CDH13P55290 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH13P55290 AC024220.1-201ENST00000603675 484 ntBASIC2.87□□□□□ -1.95
CDH13P55290 AL158032.1-201ENST00000605401 106 ntBASIC2.87□□□□□ -1.95
CDH13P55290 AL627309.6-201ENST00000606857 840 ntBASIC2.87□□□□□ -1.95
CDH13P55290 AC069200.1-201ENST00000609511 323 ntBASIC2.87□□□□□ -1.95
CDH13P55290 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.87□□□□□ -1.95
CDH13P55290 SEPT14P19-203ENST00000633205 211 ntBASIC2.87□□□□□ -1.95
CDH13P55290 U6.114-201ENST00000636407 96 ntBASIC2.87□□□□□ -1.95
CDH13P55290 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDH13P55290 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDH13P55290 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CDH13P55290 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH13P55290 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CDH13P55290 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CDH13P55290 RNU1-35P-201ENST00000362782 153 ntBASIC2.86□□□□□ -1.95
CDH13P55290 U8.9-201ENST00000365667 134 ntBASIC2.86□□□□□ -1.95
CDH13P55290 RNU6-259P-201ENST00000383999 107 ntBASIC2.86□□□□□ -1.95
CDH13P55290 Y_RNA.576-201ENST00000384781 102 ntBASIC2.86□□□□□ -1.95
CDH13P55290 MIR34B-201ENST00000385076 84 ntBASIC2.86□□□□□ -1.95
CDH13P55290 SNORA26.7-201ENST00000391288 122 ntBASIC2.86□□□□□ -1.95
CDH13P55290 RN7SKP220-201ENST00000410611 288 ntBASIC2.86□□□□□ -1.95
CDH13P55290 AC023141.4-201ENST00000412031 328 ntBASIC2.86□□□□□ -1.95
CDH13P55290 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH13P55290 OR51A5P-201ENST00000415429 942 ntBASIC2.86□□□□□ -1.95
CDH13P55290 AL451074.5-201ENST00000415894 435 ntBASIC2.86□□□□□ -1.95
CDH13P55290 AC096649.2-201ENST00000416186 393 ntBASIC2.86□□□□□ -1.95
CDH13P55290 VN1R108P-201ENST00000431580 830 ntBASIC2.86□□□□□ -1.95
CDH13P55290 RPS29P6-201ENST00000438196 145 ntBASIC2.86□□□□□ -1.95
CDH13P55290 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.86□□□□□ -1.95
CDH13P55290 WASF1P1-201ENST00000447560 1131 ntBASIC2.86□□□□□ -1.95
CDH13P55290 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH13P55290 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH13P55290 AC079382.1-201ENST00000493346 557 ntBASIC2.86□□□□□ -1.95
CDH13P55290 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.86□□□□□ -1.95
CDH13P55290 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.86□□□□□ -1.95
CDH13P55290 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH13P55290 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH13P55290 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH13P55290 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.86□□□□□ -1.95
CDH13P55290 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH13P55290 AC103591.3-201ENST00000608684 209 ntBASIC2.86□□□□□ -1.95
CDH13P55290 AC013562.2-201ENST00000611632 603 ntBASIC2.86□□□□□ -1.95
CDH13P55290 AC073534.2-201ENST00000620377 381 ntBASIC2.86□□□□□ -1.95
CDH13P55290 AC024940.5-201ENST00000622889 474 ntBASIC2.86□□□□□ -1.95
CDH13P55290 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CDH13P55290 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH13P55290 AC092447.7-201ENST00000422212 1621 ntBASIC2.86□□□□□ -1.95
CDH13P55290 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDH13P55290 MTND5P26-201ENST00000426018 1752 ntBASIC2.85□□□□□ -1.95
CDH13P55290 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDH13P55290 RPL9P7-201ENST00000330965 580 ntBASIC2.85□□□□□ -1.95
CDH13P55290 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.85□□□□□ -1.95
CDH13P55290 Y_RNA.159-201ENST00000363674 87 ntBASIC2.85□□□□□ -1.95
CDH13P55290 Y_RNA.318-201ENST00000365131 97 ntBASIC2.85□□□□□ -1.95
CDH13P55290 MIR181A2-201ENST00000384863 110 ntBASIC2.85□□□□□ -1.95
CDH13P55290 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CDH13P55290 SNORA40C-201ENST00000391285 128 ntBASIC2.85□□□□□ -1.95
CDH13P55290 CISD1P1-201ENST00000393907 327 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms