Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 NCAPGP2-201ENST00000557911 754 ntBASIC3.39□□□□□ -1.87
PMS2P54278 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.39□□□□□ -1.87
PMS2P54278 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.39□□□□□ -1.87
PMS2P54278 UBE2V2P2-201ENST00000587677 504 ntBASIC3.39□□□□□ -1.87
PMS2P54278 AL354950.2-201ENST00000617939 290 ntBASIC3.39□□□□□ -1.87
PMS2P54278 AC104985.2-201ENST00000620598 500 ntBASIC3.39□□□□□ -1.87
PMS2P54278 AC093648.1-201ENST00000623546 606 ntBASIC3.39□□□□□ -1.87
PMS2P54278 AC009033.1-201ENST00000624279 431 ntBASIC3.39□□□□□ -1.87
PMS2P54278 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.39□□□□□ -1.87
PMS2P54278 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.39□□□□□ -1.87
PMS2P54278 AC099654.5-201ENST00000636479 350 ntBASIC3.39□□□□□ -1.87
PMS2P54278 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.39□□□□□ -1.87
PMS2P54278 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.39□□□□□ -1.87
PMS2P54278 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PMS2P54278 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
PMS2P54278 AL137003.2-201ENST00000606924 2538 ntBASIC3.38□□□□□ -1.87
PMS2P54278 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.38□□□□□ -1.87
PMS2P54278 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PMS2P54278 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.38□□□□□ -1.87
PMS2P54278 SNORA1.3-201ENST00000384676 136 ntBASIC3.38□□□□□ -1.87
PMS2P54278 RNU6-1068P-201ENST00000410958 103 ntBASIC3.38□□□□□ -1.87
PMS2P54278 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.38□□□□□ -1.87
PMS2P54278 SRIP2-201ENST00000428470 166 ntBASIC3.38□□□□□ -1.87
PMS2P54278 RPL36AP53-201ENST00000432891 316 ntBASIC3.38□□□□□ -1.87
PMS2P54278 AC098614.3-201ENST00000438957 440 ntBASIC3.38□□□□□ -1.87
PMS2P54278 USP9YP8-201ENST00000441913 500 ntBASIC3.38□□□□□ -1.87
PMS2P54278 AC009237.8-201ENST00000445492 379 ntBASIC3.38□□□□□ -1.87
PMS2P54278 GAPDHP27-201ENST00000447427 1020 ntBASIC3.38□□□□□ -1.87
PMS2P54278 AC073415.1-201ENST00000449240 153 ntBASIC3.38□□□□□ -1.87
PMS2P54278 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.38□□□□□ -1.87
PMS2P54278 RNU7-182P-201ENST00000459009 62 ntBASIC3.38□□□□□ -1.87
PMS2P54278 AC008155.2-201ENST00000464337 397 ntBASIC3.38□□□□□ -1.87
PMS2P54278 RPL21P8-201ENST00000465083 535 ntBASIC3.38□□□□□ -1.87
PMS2P54278 MRPS17P3-201ENST00000465453 385 ntBASIC3.38□□□□□ -1.87
PMS2P54278 HMGN2P13-201ENST00000476476 274 ntBASIC3.38□□□□□ -1.87
PMS2P54278 AC233702.1-201ENST00000482905 502 ntBASIC3.38□□□□□ -1.87
PMS2P54278 RPL30P5-201ENST00000494923 336 ntBASIC3.38□□□□□ -1.87
PMS2P54278 HMGN1P12-201ENST00000499125 195 ntBASIC3.38□□□□□ -1.87
PMS2P54278 AC091951.2-201ENST00000500762 203 ntBASIC3.38□□□□□ -1.87
PMS2P54278 RPL38P4-201ENST00000502376 214 ntBASIC3.38□□□□□ -1.87
PMS2P54278 RNU6-875P-201ENST00000516488 106 ntBASIC3.38□□□□□ -1.87
PMS2P54278 RNU6-1092P-201ENST00000516955 87 ntBASIC3.38□□□□□ -1.87
PMS2P54278 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.38□□□□□ -1.87
PMS2P54278 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.38□□□□□ -1.87
PMS2P54278 CENPUP1-201ENST00000526649 1202 ntBASIC3.38□□□□□ -1.87
PMS2P54278 OR5B19P-201ENST00000531766 928 ntBASIC3.38□□□□□ -1.87
PMS2P54278 AC005476.1-201ENST00000554427 397 ntBASIC3.38□□□□□ -1.87
PMS2P54278 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.38□□□□□ -1.87
PMS2P54278 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.38□□□□□ -1.87
PMS2P54278 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.38□□□□□ -1.87
PMS2P54278 AC008962.1-201ENST00000605729 304 ntBASIC3.38□□□□□ -1.87
PMS2P54278 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.38□□□□□ -1.87
PMS2P54278 AL591516.1-201ENST00000611326 274 ntBASIC3.38□□□□□ -1.87
PMS2P54278 AC130324.3-201ENST00000614165 542 ntBASIC3.38□□□□□ -1.87
PMS2P54278 AC068831.7-201ENST00000616954 363 ntBASIC3.38□□□□□ -1.87
PMS2P54278 MIR6076-201ENST00000617521 113 ntBASIC3.38□□□□□ -1.87
PMS2P54278 uc_338.11-201ENST00000619132 160 ntBASIC3.38□□□□□ -1.87
PMS2P54278 AC091903.1-201ENST00000624322 454 ntBASIC3.38□□□□□ -1.87
PMS2P54278 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.38□□□□□ -1.87
PMS2P54278 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.38□□□□□ -1.87
PMS2P54278 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PMS2P54278 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.38□□□□□ -1.87
PMS2P54278 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PMS2P54278 AC093831.2-201ENST00000624393 3427 ntBASIC3.37□□□□□ -1.87
PMS2P54278 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.37□□□□□ -1.87
PMS2P54278 Y_RNA.72-201ENST00000362894 103 ntBASIC3.37□□□□□ -1.87
PMS2P54278 RNU6-797P-201ENST00000363101 109 ntBASIC3.37□□□□□ -1.87
PMS2P54278 Y_RNA.157-201ENST00000363638 102 ntBASIC3.37□□□□□ -1.87
PMS2P54278 Y_RNA.160-201ENST00000363677 92 ntBASIC3.37□□□□□ -1.87
PMS2P54278 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PMS2P54278 RPS4XP3-201ENST00000398541 413 ntBASIC3.37□□□□□ -1.87
PMS2P54278 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PMS2P54278 AL591416.1-201ENST00000404015 867 ntBASIC3.37□□□□□ -1.87
PMS2P54278 AL359634.1-202ENST00000404721 284 ntBASIC3.37□□□□□ -1.87
PMS2P54278 RN7SKP123-201ENST00000410732 291 ntBASIC3.37□□□□□ -1.87
PMS2P54278 RN7SKP140-201ENST00000411196 284 ntBASIC3.37□□□□□ -1.87
PMS2P54278 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PMS2P54278 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.37□□□□□ -1.87
PMS2P54278 TAAR7P-201ENST00000436141 242 ntBASIC3.37□□□□□ -1.87
PMS2P54278 AC005019.1-201ENST00000436455 431 ntBASIC3.37□□□□□ -1.87
PMS2P54278 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.37□□□□□ -1.87
PMS2P54278 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.37□□□□□ -1.87
PMS2P54278 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.37□□□□□ -1.87
PMS2P54278 RPL21P10-201ENST00000463521 490 ntBASIC3.37□□□□□ -1.87
PMS2P54278 AC010631.1-201ENST00000474150 156 ntBASIC3.37□□□□□ -1.87
PMS2P54278 RPS29P2-201ENST00000479278 136 ntBASIC3.37□□□□□ -1.87
PMS2P54278 AC008628.2-201ENST00000502605 298 ntBASIC3.37□□□□□ -1.87
PMS2P54278 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.37□□□□□ -1.87
PMS2P54278 RNU6-1256P-201ENST00000516539 103 ntBASIC3.37□□□□□ -1.87
PMS2P54278 RN7SKP219-201ENST00000516825 296 ntBASIC3.37□□□□□ -1.87
PMS2P54278 AP005435.4-201ENST00000529514 284 ntBASIC3.37□□□□□ -1.87
PMS2P54278 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.37□□□□□ -1.87
PMS2P54278 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.37□□□□□ -1.87
PMS2P54278 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.37□□□□□ -1.87
PMS2P54278 AC005951.2-201ENST00000576282 495 ntBASIC3.37□□□□□ -1.87
PMS2P54278 AC024619.4-201ENST00000580924 316 ntBASIC3.37□□□□□ -1.87
PMS2P54278 FGF7P1-201ENST00000582820 288 ntBASIC3.37□□□□□ -1.87
PMS2P54278 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.37□□□□□ -1.87
PMS2P54278 BNIP3P10-201ENST00000605360 577 ntBASIC3.37□□□□□ -1.87
PMS2P54278 AC008945.2-201ENST00000606056 604 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 251.5 ms