Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
PMS1P54277 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PMS1P54277 MIR7641-1-201ENST00000627518 61 ntBASIC4.41□□□□□ -1.7
PMS1P54277 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.41□□□□□ -1.7
PMS1P54277 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.41□□□□□ -1.7
PMS1P54277 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PMS1P54277 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PMS1P54277 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.41□□□□□ -1.7
PMS1P54277 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PMS1P54277 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PMS1P54277 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.4□□□□□ -1.7
PMS1P54277 NCAPGP1-201ENST00000505112 1814 ntBASIC4.4□□□□□ -1.7
PMS1P54277 RNU6-933P-201ENST00000384424 107 ntBASIC4.4□□□□□ -1.71
PMS1P54277 HMGB3P2-201ENST00000411913 584 ntBASIC4.4□□□□□ -1.71
PMS1P54277 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PMS1P54277 Z85995.1-201ENST00000415547 335 ntBASIC4.4□□□□□ -1.71
PMS1P54277 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PMS1P54277 CYP4F29P-201ENST00000420685 446 ntBASIC4.4□□□□□ -1.71
PMS1P54277 NDUFB4P7-201ENST00000423198 363 ntBASIC4.4□□□□□ -1.71
PMS1P54277 RPL27AP8-201ENST00000424277 446 ntBASIC4.4□□□□□ -1.71
PMS1P54277 AC007919.1-201ENST00000429380 217 ntBASIC4.4□□□□□ -1.71
PMS1P54277 NUTF2P3-201ENST00000448540 384 ntBASIC4.4□□□□□ -1.71
PMS1P54277 AC133473.1-201ENST00000455173 299 ntBASIC4.4□□□□□ -1.71
PMS1P54277 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.4□□□□□ -1.71
PMS1P54277 RPL9P32-201ENST00000464118 620 ntBASIC4.4□□□□□ -1.71
PMS1P54277 AC011005.2-201ENST00000487324 359 ntBASIC4.4□□□□□ -1.71
PMS1P54277 RNA5SP290-201ENST00000517133 127 ntBASIC4.4□□□□□ -1.71
PMS1P54277 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.4□□□□□ -1.71
PMS1P54277 AC123912.5-201ENST00000605470 343 ntBASIC4.4□□□□□ -1.71
PMS1P54277 AL713922.2-201ENST00000619384 716 ntBASIC4.4□□□□□ -1.71
PMS1P54277 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.4□□□□□ -1.71
PMS1P54277 AC119674.1-207ENST00000641355 633 ntBASIC4.4□□□□□ -1.71
PMS1P54277 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.4□□□□□ -1.71
PMS1P54277 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PMS1P54277 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PMS1P54277 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.4□□□□□ -1.71
PMS1P54277 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.4□□□□□ -1.71
PMS1P54277 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PMS1P54277 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PMS1P54277 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PMS1P54277 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PMS1P54277 MIR412-201ENST00000362142 91 ntBASIC4.39□□□□□ -1.71
PMS1P54277 Y_RNA.39-201ENST00000362620 98 ntBASIC4.39□□□□□ -1.71
PMS1P54277 Y_RNA.47-201ENST00000362697 108 ntBASIC4.39□□□□□ -1.71
PMS1P54277 Y_RNA.176-201ENST00000363815 109 ntBASIC4.39□□□□□ -1.71
PMS1P54277 RNA5SP130-201ENST00000364431 114 ntBASIC4.39□□□□□ -1.71
PMS1P54277 Y_RNA.389-201ENST00000383924 113 ntBASIC4.39□□□□□ -1.71
PMS1P54277 RNU6-325P-201ENST00000411132 105 ntBASIC4.39□□□□□ -1.71
PMS1P54277 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.39□□□□□ -1.71
PMS1P54277 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.39□□□□□ -1.71
PMS1P54277 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.39□□□□□ -1.71
PMS1P54277 H2AFZP6-201ENST00000444403 394 ntBASIC4.39□□□□□ -1.71
PMS1P54277 FABP5P15-201ENST00000453566 214 ntBASIC4.39□□□□□ -1.71
PMS1P54277 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.39□□□□□ -1.71
PMS1P54277 ACA59.1-201ENST00000515966 143 ntBASIC4.39□□□□□ -1.71
PMS1P54277 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.39□□□□□ -1.71
PMS1P54277 AC023575.1-201ENST00000580510 358 ntBASIC4.39□□□□□ -1.71
PMS1P54277 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.39□□□□□ -1.71
PMS1P54277 AC104695.3-201ENST00000604052 296 ntBASIC4.39□□□□□ -1.71
PMS1P54277 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.39□□□□□ -1.71
PMS1P54277 MIR4727-201ENST00000622232 55 ntBASIC4.39□□□□□ -1.71
PMS1P54277 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PMS1P54277 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PMS1P54277 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PMS1P54277 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PMS1P54277 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.39□□□□□ -1.71
PMS1P54277 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PMS1P54277 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PMS1P54277 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.38□□□□□ -1.71
PMS1P54277 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PMS1P54277 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.38□□□□□ -1.71
PMS1P54277 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PMS1P54277 SNORA60-201ENST00000362396 134 ntBASIC4.38□□□□□ -1.71
PMS1P54277 RNU6-596P-201ENST00000365395 98 ntBASIC4.38□□□□□ -1.71
PMS1P54277 RNA5SP167-201ENST00000365461 116 ntBASIC4.38□□□□□ -1.71
PMS1P54277 RNU2-23P-201ENST00000410545 195 ntBASIC4.38□□□□□ -1.71
PMS1P54277 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.38□□□□□ -1.71
PMS1P54277 BX276092.3-201ENST00000424182 230 ntBASIC4.38□□□□□ -1.71
PMS1P54277 AC093151.1-201ENST00000427711 313 ntBASIC4.38□□□□□ -1.71
PMS1P54277 AL158071.1-201ENST00000430315 461 ntBASIC4.38□□□□□ -1.71
PMS1P54277 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.38□□□□□ -1.71
PMS1P54277 AC087650.1-201ENST00000431445 468 ntBASIC4.38□□□□□ -1.71
PMS1P54277 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.38□□□□□ -1.71
PMS1P54277 AC083863.1-201ENST00000438811 231 ntBASIC4.38□□□□□ -1.71
PMS1P54277 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.38□□□□□ -1.71
PMS1P54277 RN7SL271P-201ENST00000487601 295 ntBASIC4.38□□□□□ -1.71
PMS1P54277 AC113155.1-201ENST00000511141 769 ntBASIC4.38□□□□□ -1.71
PMS1P54277 AC026726.1-201ENST00000512859 601 ntBASIC4.38□□□□□ -1.71
PMS1P54277 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.38□□□□□ -1.71
PMS1P54277 Y_RNA.721-201ENST00000517207 102 ntBASIC4.38□□□□□ -1.71
PMS1P54277 AP002404.1-201ENST00000532005 451 ntBASIC4.38□□□□□ -1.71
PMS1P54277 AC004024.1-201ENST00000549244 247 ntBASIC4.38□□□□□ -1.71
PMS1P54277 SUB1P3-201ENST00000564581 315 ntBASIC4.38□□□□□ -1.71
PMS1P54277 AC113195.1-201ENST00000579952 141 ntBASIC4.38□□□□□ -1.71
PMS1P54277 MIR3939-201ENST00000582614 106 ntBASIC4.38□□□□□ -1.71
PMS1P54277 MIR4273-201ENST00000582824 84 ntBASIC4.38□□□□□ -1.71
PMS1P54277 AL121917.1-203ENST00000605534 577 ntBASIC4.38□□□□□ -1.71
PMS1P54277 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.38□□□□□ -1.71
PMS1P54277 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.38□□□□□ -1.71
PMS1P54277 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms