Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 Y_RNA.231-201ENST00000364358 102 ntBASIC3.64□□□□□ -1.83
COPAP53621 RNA5SP267-201ENST00000364893 126 ntBASIC3.64□□□□□ -1.83
COPAP53621 RNU4-66P-201ENST00000365199 138 ntBASIC3.64□□□□□ -1.83
COPAP53621 MIR491-201ENST00000384877 84 ntBASIC3.64□□□□□ -1.83
COPAP53621 RPS4XP3-201ENST00000398541 413 ntBASIC3.64□□□□□ -1.83
COPAP53621 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COPAP53621 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COPAP53621 AC009161.1-201ENST00000417306 376 ntBASIC3.64□□□□□ -1.83
COPAP53621 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.64□□□□□ -1.83
COPAP53621 AC104058.1-201ENST00000448028 297 ntBASIC3.64□□□□□ -1.83
COPAP53621 AL590664.1-201ENST00000448065 339 ntBASIC3.64□□□□□ -1.83
COPAP53621 MRPS31P2-201ENST00000451581 518 ntBASIC3.64□□□□□ -1.83
COPAP53621 MTND3P16-201ENST00000452205 344 ntBASIC3.64□□□□□ -1.83
COPAP53621 RPL23AP14-201ENST00000468281 468 ntBASIC3.64□□□□□ -1.83
COPAP53621 RPL23AP11-201ENST00000475260 469 ntBASIC3.64□□□□□ -1.83
COPAP53621 RPL32P34-201ENST00000486380 400 ntBASIC3.64□□□□□ -1.83
COPAP53621 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.64□□□□□ -1.83
COPAP53621 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.64□□□□□ -1.83
COPAP53621 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.64□□□□□ -1.83
COPAP53621 AC011712.1-201ENST00000588959 234 ntBASIC3.64□□□□□ -1.83
COPAP53621 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.64□□□□□ -1.83
COPAP53621 AL138880.2-201ENST00000616214 239 ntBASIC3.64□□□□□ -1.83
COPAP53621 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.64□□□□□ -1.83
COPAP53621 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.64□□□□□ -1.83
COPAP53621 AL512643.1-201ENST00000635735 524 ntBASIC3.64□□□□□ -1.83
COPAP53621 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COPAP53621 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COPAP53621 CBX3P1-201ENST00000325243 554 ntBASIC3.63□□□□□ -1.83
COPAP53621 SNORA14A-201ENST00000364773 135 ntBASIC3.63□□□□□ -1.83
COPAP53621 RNU6-332P-201ENST00000391193 108 ntBASIC3.63□□□□□ -1.83
COPAP53621 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COPAP53621 AL139039.1-201ENST00000401900 692 ntBASIC3.63□□□□□ -1.83
COPAP53621 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.63□□□□□ -1.83
COPAP53621 GPM6BP2-201ENST00000432046 144 ntBASIC3.63□□□□□ -1.83
COPAP53621 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.63□□□□□ -1.83
COPAP53621 AL512844.2-201ENST00000433990 593 ntBASIC3.63□□□□□ -1.83
COPAP53621 Z82210.1-201ENST00000440037 231 ntBASIC3.63□□□□□ -1.83
COPAP53621 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.63□□□□□ -1.83
COPAP53621 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.63□□□□□ -1.83
COPAP53621 GPM6BP1-201ENST00000446387 144 ntBASIC3.63□□□□□ -1.83
COPAP53621 PMCHL2-203ENST00000457791 237 ntBASIC3.63□□□□□ -1.83
COPAP53621 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.63□□□□□ -1.83
COPAP53621 RPS15AP34-201ENST00000487776 387 ntBASIC3.63□□□□□ -1.83
COPAP53621 AC091885.1-201ENST00000506658 268 ntBASIC3.63□□□□□ -1.83
COPAP53621 AC046134.1-201ENST00000514454 666 ntBASIC3.63□□□□□ -1.83
COPAP53621 SNORA74D-201ENST00000516404 141 ntBASIC3.63□□□□□ -1.83
COPAP53621 SNORA70.24-201ENST00000517233 118 ntBASIC3.63□□□□□ -1.83
COPAP53621 MTND4P7-201ENST00000523876 130 ntBASIC3.63□□□□□ -1.83
COPAP53621 CASP1P1-201ENST00000526345 212 ntBASIC3.63□□□□□ -1.83
COPAP53621 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.63□□□□□ -1.83
COPAP53621 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.63□□□□□ -1.83
COPAP53621 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.63□□□□□ -1.83
COPAP53621 UBE2V2P2-201ENST00000587677 504 ntBASIC3.63□□□□□ -1.83
COPAP53621 AC018638.8-201ENST00000588755 281 ntBASIC3.63□□□□□ -1.83
COPAP53621 uc_338.34-201ENST00000617467 174 ntBASIC3.63□□□□□ -1.83
COPAP53621 Z99571.1-201ENST00000636677 394 ntBASIC3.63□□□□□ -1.83
COPAP53621 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.63□□□□□ -1.83
COPAP53621 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.63□□□□□ -1.83
COPAP53621 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.63□□□□□ -1.83
COPAP53621 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
COPAP53621 Y_RNA.70-201ENST00000362886 110 ntBASIC3.62□□□□□ -1.83
COPAP53621 RNU1-33P-201ENST00000364249 162 ntBASIC3.62□□□□□ -1.83
COPAP53621 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
COPAP53621 MIR483-201ENST00000385070 76 ntBASIC3.62□□□□□ -1.83
COPAP53621 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.62□□□□□ -1.83
COPAP53621 EEF1A1P40-201ENST00000412883 573 ntBASIC3.62□□□□□ -1.83
COPAP53621 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.62□□□□□ -1.83
COPAP53621 AL158156.1-201ENST00000422509 473 ntBASIC3.62□□□□□ -1.83
COPAP53621 AL160275.3-201ENST00000423876 471 ntBASIC3.62□□□□□ -1.83
COPAP53621 SRIP2-201ENST00000428470 166 ntBASIC3.62□□□□□ -1.83
COPAP53621 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.62□□□□□ -1.83
COPAP53621 ERLEC1P1-201ENST00000433806 578 ntBASIC3.62□□□□□ -1.83
COPAP53621 NDUFB1P1-201ENST00000435191 180 ntBASIC3.62□□□□□ -1.83
COPAP53621 USP9YP8-201ENST00000441913 500 ntBASIC3.62□□□□□ -1.83
COPAP53621 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.62□□□□□ -1.83
COPAP53621 AC006539.3-201ENST00000454258 129 ntBASIC3.62□□□□□ -1.83
COPAP53621 RNU7-180P-201ENST00000459240 63 ntBASIC3.62□□□□□ -1.83
COPAP53621 RPL21P99-201ENST00000480369 423 ntBASIC3.62□□□□□ -1.83
COPAP53621 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.62□□□□□ -1.83
COPAP53621 MTCO2P30-201ENST00000503662 364 ntBASIC3.62□□□□□ -1.83
COPAP53621 AC010486.1-201ENST00000511793 424 ntBASIC3.62□□□□□ -1.83
COPAP53621 AC008549.1-201ENST00000512900 643 ntBASIC3.62□□□□□ -1.83
COPAP53621 AC093331.1-201ENST00000521474 169 ntBASIC3.62□□□□□ -1.83
COPAP53621 AL137161.1-201ENST00000532231 390 ntBASIC3.62□□□□□ -1.83
COPAP53621 TGIF1P1-201ENST00000558095 802 ntBASIC3.62□□□□□ -1.83
COPAP53621 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.62□□□□□ -1.83
COPAP53621 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.62□□□□□ -1.83
COPAP53621 AC006077.1-201ENST00000604746 343 ntBASIC3.62□□□□□ -1.83
COPAP53621 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.62□□□□□ -1.83
COPAP53621 AL355365.1-201ENST00000616480 294 ntBASIC3.62□□□□□ -1.83
COPAP53621 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.62□□□□□ -1.83
COPAP53621 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.62□□□□□ -1.83
COPAP53621 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
COPAP53621 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
COPAP53621 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.62□□□□□ -1.83
COPAP53621 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COPAP53621 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COPAP53621 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
COPAP53621 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.61□□□□□ -1.83
COPAP53621 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms