Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 SDR42E1P2-201ENST00000614861 481 ntBASIC3.61□□□□□ -1.83
COPB1P53618 uc_338.34-201ENST00000617467 174 ntBASIC3.61□□□□□ -1.83
COPB1P53618 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.61□□□□□ -1.83
COPB1P53618 TPTE2P4-201ENST00000258589 1605 ntBASIC3.61□□□□□ -1.83
COPB1P53618 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
COPB1P53618 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.61□□□□□ -1.83
COPB1P53618 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.61□□□□□ -1.83
COPB1P53618 AL157700.1-201ENST00000561973 1432 ntBASIC3.61□□□□□ -1.83
COPB1P53618 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
COPB1P53618 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
COPB1P53618 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
COPB1P53618 MIR148B-201ENST00000362252 99 ntBASIC3.6□□□□□ -1.83
COPB1P53618 RNU6-1287P-201ENST00000362914 107 ntBASIC3.6□□□□□ -1.83
COPB1P53618 Y_RNA.100-201ENST00000363141 102 ntBASIC3.6□□□□□ -1.83
COPB1P53618 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
COPB1P53618 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COPB1P53618 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COPB1P53618 SNORA32.2-201ENST00000384049 122 ntBASIC3.6□□□□□ -1.83
COPB1P53618 RNU6-1060P-201ENST00000384664 107 ntBASIC3.6□□□□□ -1.83
COPB1P53618 RNU4-46P-201ENST00000410818 138 ntBASIC3.6□□□□□ -1.83
COPB1P53618 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.6□□□□□ -1.83
COPB1P53618 MTND1P14-201ENST00000427400 950 ntBASIC3.6□□□□□ -1.83
COPB1P53618 MRPL50P4-201ENST00000446432 475 ntBASIC3.6□□□□□ -1.83
COPB1P53618 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.6□□□□□ -1.83
COPB1P53618 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.6□□□□□ -1.83
COPB1P53618 RPL23AP55-201ENST00000498163 452 ntBASIC3.6□□□□□ -1.83
COPB1P53618 RNA5SP217-201ENST00000515959 91 ntBASIC3.6□□□□□ -1.83
COPB1P53618 SNORA74D-201ENST00000516404 141 ntBASIC3.6□□□□□ -1.83
COPB1P53618 RN7SKP258-201ENST00000517151 304 ntBASIC3.6□□□□□ -1.83
COPB1P53618 RPL7P20-201ENST00000520308 745 ntBASIC3.6□□□□□ -1.83
COPB1P53618 MTND4P7-201ENST00000523876 130 ntBASIC3.6□□□□□ -1.83
COPB1P53618 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.6□□□□□ -1.83
COPB1P53618 AC022690.1-201ENST00000526681 550 ntBASIC3.6□□□□□ -1.83
COPB1P53618 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.6□□□□□ -1.83
COPB1P53618 SCOCP1-201ENST00000554676 349 ntBASIC3.6□□□□□ -1.83
COPB1P53618 MIR4742-201ENST00000581069 85 ntBASIC3.6□□□□□ -1.83
COPB1P53618 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.6□□□□□ -1.83
COPB1P53618 AC012409.4-201ENST00000612923 249 ntBASIC3.6□□□□□ -1.83
COPB1P53618 XIST_intron.1-201ENST00000619444 68 ntBASIC3.6□□□□□ -1.83
COPB1P53618 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.6□□□□□ -1.83
COPB1P53618 AC006026.1-201ENST00000444025 1803 ntBASIC3.6□□□□□ -1.83
COPB1P53618 ZNF826P-207ENST00000622273 1910 ntBASIC3.6□□□□□ -1.83
COPB1P53618 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.6□□□□□ -1.83
COPB1P53618 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COPB1P53618 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COPB1P53618 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.59□□□□□ -1.83
COPB1P53618 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
COPB1P53618 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COPB1P53618 Y_RNA.378-201ENST00000365652 113 ntBASIC3.59□□□□□ -1.83
COPB1P53618 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COPB1P53618 CALM2P2-201ENST00000428512 440 ntBASIC3.59□□□□□ -1.83
COPB1P53618 AL365400.1-201ENST00000431854 640 ntBASIC3.59□□□□□ -1.83
COPB1P53618 NEFMP1-201ENST00000443423 1006 ntBASIC3.59□□□□□ -1.83
COPB1P53618 RPL21P23-201ENST00000446654 460 ntBASIC3.59□□□□□ -1.83
COPB1P53618 PRDX3P3-201ENST00000447765 522 ntBASIC3.59□□□□□ -1.83
COPB1P53618 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.59□□□□□ -1.83
COPB1P53618 RPS24P6-201ENST00000452670 400 ntBASIC3.59□□□□□ -1.83
COPB1P53618 RNU6-1208P-201ENST00000459588 107 ntBASIC3.59□□□□□ -1.83
COPB1P53618 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.59□□□□□ -1.83
COPB1P53618 AC103851.1-201ENST00000506833 274 ntBASIC3.59□□□□□ -1.83
COPB1P53618 KLHL2P1-201ENST00000508691 521 ntBASIC3.59□□□□□ -1.83
COPB1P53618 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.59□□□□□ -1.83
COPB1P53618 AC074250.1-201ENST00000511117 192 ntBASIC3.59□□□□□ -1.83
COPB1P53618 RNU6-277P-201ENST00000516272 106 ntBASIC3.59□□□□□ -1.83
COPB1P53618 RNU6-1038P-201ENST00000516516 104 ntBASIC3.59□□□□□ -1.83
COPB1P53618 RN7SKP256-201ENST00000517201 314 ntBASIC3.59□□□□□ -1.83
COPB1P53618 ERHP1-201ENST00000523006 310 ntBASIC3.59□□□□□ -1.83
COPB1P53618 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COPB1P53618 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.59□□□□□ -1.83
COPB1P53618 MIR4795-201ENST00000584182 89 ntBASIC3.59□□□□□ -1.83
COPB1P53618 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.59□□□□□ -1.83
COPB1P53618 AC135507.2-201ENST00000612443 309 ntBASIC3.59□□□□□ -1.83
COPB1P53618 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.59□□□□□ -1.83
COPB1P53618 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.59□□□□□ -1.83
COPB1P53618 AC099654.10-201ENST00000640395 161 ntBASIC3.59□□□□□ -1.83
COPB1P53618 AC091152.2-201ENST00000591628 2569 ntBASIC3.59□□□□□ -1.83
COPB1P53618 AC005183.1-201ENST00000603687 1979 ntBASIC3.59□□□□□ -1.83
COPB1P53618 AC004925.1-201ENST00000624256 2706 ntBASIC3.59□□□□□ -1.83
COPB1P53618 MTND4P14-201ENST00000435799 1354 ntBASIC3.59□□□□□ -1.83
COPB1P53618 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COPB1P53618 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
COPB1P53618 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
COPB1P53618 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
COPB1P53618 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
COPB1P53618 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.58□□□□□ -1.84
COPB1P53618 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
COPB1P53618 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
COPB1P53618 SNORA51.2-201ENST00000364595 132 ntBASIC3.58□□□□□ -1.84
COPB1P53618 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
COPB1P53618 SNORA9-201ENST00000384215 133 ntBASIC3.58□□□□□ -1.84
COPB1P53618 AL592114.1-201ENST00000403842 483 ntBASIC3.58□□□□□ -1.84
COPB1P53618 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.58□□□□□ -1.84
COPB1P53618 NDUFB4P5-201ENST00000415445 361 ntBASIC3.58□□□□□ -1.84
COPB1P53618 ARL5AP1-201ENST00000418991 388 ntBASIC3.58□□□□□ -1.84
COPB1P53618 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.58□□□□□ -1.84
COPB1P53618 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.58□□□□□ -1.84
COPB1P53618 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.58□□□□□ -1.84
COPB1P53618 RNU7-66P-201ENST00000459469 62 ntBASIC3.58□□□□□ -1.84
COPB1P53618 RPL21P8-201ENST00000465083 535 ntBASIC3.58□□□□□ -1.84
COPB1P53618 AC010285.1-201ENST00000470580 392 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms