Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
ACLYP53396 DUSP12P1-201ENST00000612874 516 ntBASIC2.21□□□□□ -2.06
ACLYP53396 AC025594.3-201ENST00000613068 790 ntBASIC2.21□□□□□ -2.06
ACLYP53396 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.21□□□□□ -2.06
ACLYP53396 MIR7157-201ENST00000635801 60 ntBASIC2.21□□□□□ -2.06
ACLYP53396 AC080100.1-201ENST00000624239 5356 ntBASIC2.21□□□□□ -2.06
ACLYP53396 AC005336.3-201ENST00000623833 2679 ntBASIC2.21□□□□□ -2.06
ACLYP53396 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.2□□□□□ -2.06
ACLYP53396 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ACLYP53396 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.2□□□□□ -2.06
ACLYP53396 MIRLET7G-201ENST00000362280 84 ntBASIC2.2□□□□□ -2.06
ACLYP53396 RNU4-92P-201ENST00000363783 136 ntBASIC2.2□□□□□ -2.06
ACLYP53396 Y_RNA.226-201ENST00000364337 114 ntBASIC2.2□□□□□ -2.06
ACLYP53396 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.2□□□□□ -2.06
ACLYP53396 AL139397.2-201ENST00000404529 772 ntBASIC2.2□□□□□ -2.06
ACLYP53396 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.2□□□□□ -2.06
ACLYP53396 U3.37-201ENST00000408528 213 ntBASIC2.2□□□□□ -2.06
ACLYP53396 RNU6-920P-201ENST00000410926 92 ntBASIC2.2□□□□□ -2.06
ACLYP53396 MTCO2P20-201ENST00000437339 673 ntBASIC2.2□□□□□ -2.06
ACLYP53396 AL591719.1-201ENST00000444669 744 ntBASIC2.2□□□□□ -2.06
ACLYP53396 EXOSC3P1-201ENST00000448649 500 ntBASIC2.2□□□□□ -2.06
ACLYP53396 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
ACLYP53396 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.2□□□□□ -2.06
ACLYP53396 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.2□□□□□ -2.06
ACLYP53396 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.2□□□□□ -2.06
ACLYP53396 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.2□□□□□ -2.06
ACLYP53396 HMGB3P3-201ENST00000510526 400 ntBASIC2.2□□□□□ -2.06
ACLYP53396 MTCYBP43-201ENST00000513621 740 ntBASIC2.2□□□□□ -2.06
ACLYP53396 SNORD19.2-201ENST00000516978 73 ntBASIC2.2□□□□□ -2.06
ACLYP53396 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.2□□□□□ -2.06
ACLYP53396 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.2□□□□□ -2.06
ACLYP53396 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.2□□□□□ -2.06
ACLYP53396 MRPS36P5-201ENST00000551909 298 ntBASIC2.2□□□□□ -2.06
ACLYP53396 AC022662.1-201ENST00000580252 331 ntBASIC2.2□□□□□ -2.06
ACLYP53396 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.2□□□□□ -2.06
ACLYP53396 BNIP3P8-201ENST00000597863 560 ntBASIC2.2□□□□□ -2.06
ACLYP53396 AL355598.1-201ENST00000604169 202 ntBASIC2.2□□□□□ -2.06
ACLYP53396 AC025588.2-201ENST00000604851 466 ntBASIC2.2□□□□□ -2.06
ACLYP53396 RNU6-88P-201ENST00000606801 100 ntBASIC2.2□□□□□ -2.06
ACLYP53396 AC080013.3-201ENST00000606839 578 ntBASIC2.2□□□□□ -2.06
ACLYP53396 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.2□□□□□ -2.06
ACLYP53396 AC244517.12-201ENST00000623581 663 ntBASIC2.2□□□□□ -2.06
ACLYP53396 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.2□□□□□ -2.06
ACLYP53396 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.2□□□□□ -2.06
ACLYP53396 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
ACLYP53396 MIR122-201ENST00000385044 85 ntBASIC2.19□□□□□ -2.06
ACLYP53396 Z82209.1-201ENST00000422141 2135 ntBASIC2.19□□□□□ -2.06
ACLYP53396 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ACLYP53396 GPM6BP2-201ENST00000432046 144 ntBASIC2.19□□□□□ -2.06
ACLYP53396 RPL36AP53-201ENST00000432891 316 ntBASIC2.19□□□□□ -2.06
ACLYP53396 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.19□□□□□ -2.06
ACLYP53396 GPM6BP1-201ENST00000446387 144 ntBASIC2.19□□□□□ -2.06
ACLYP53396 FABP5P15-201ENST00000453566 214 ntBASIC2.19□□□□□ -2.06
ACLYP53396 AC134050.1-201ENST00000495088 933 ntBASIC2.19□□□□□ -2.06
ACLYP53396 AC010186.2-204ENST00000537668 439 ntBASIC2.19□□□□□ -2.06
ACLYP53396 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.19□□□□□ -2.06
ACLYP53396 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.19□□□□□ -2.06
ACLYP53396 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.19□□□□□ -2.06
ACLYP53396 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.19□□□□□ -2.06
ACLYP53396 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.19□□□□□ -2.06
ACLYP53396 MIR5089-201ENST00000580047 84 ntBASIC2.19□□□□□ -2.06
ACLYP53396 RPP40P2-201ENST00000603596 712 ntBASIC2.19□□□□□ -2.06
ACLYP53396 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ACLYP53396 AL021997.1-201ENST00000605757 193 ntBASIC2.19□□□□□ -2.06
ACLYP53396 AC010678.1-201ENST00000614118 713 ntBASIC2.19□□□□□ -2.06
ACLYP53396 AC012150.2-201ENST00000621300 544 ntBASIC2.19□□□□□ -2.06
ACLYP53396 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ACLYP53396 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.18□□□□□ -2.06
ACLYP53396 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ACLYP53396 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.18□□□□□ -2.06
ACLYP53396 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.18□□□□□ -2.06
ACLYP53396 SNORA4.1-201ENST00000364263 144 ntBASIC2.18□□□□□ -2.06
ACLYP53396 AL021407.1-201ENST00000404531 386 ntBASIC2.18□□□□□ -2.06
ACLYP53396 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.18□□□□□ -2.06
ACLYP53396 AL353729.1-201ENST00000425044 720 ntBASIC2.18□□□□□ -2.06
ACLYP53396 ISCA1P1-201ENST00000426679 387 ntBASIC2.18□□□□□ -2.06
ACLYP53396 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.18□□□□□ -2.06
ACLYP53396 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.18□□□□□ -2.06
ACLYP53396 MTND3P1-201ENST00000441336 220 ntBASIC2.18□□□□□ -2.06
ACLYP53396 HMGN2P10-201ENST00000448085 265 ntBASIC2.18□□□□□ -2.06
ACLYP53396 AC104564.1-201ENST00000493028 407 ntBASIC2.18□□□□□ -2.06
ACLYP53396 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.18□□□□□ -2.06
ACLYP53396 AC026801.1-201ENST00000497178 464 ntBASIC2.18□□□□□ -2.06
ACLYP53396 GZMAP1-201ENST00000503054 631 ntBASIC2.18□□□□□ -2.06
ACLYP53396 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.18□□□□□ -2.06
ACLYP53396 SCARNA3-201ENST00000517097 143 ntBASIC2.18□□□□□ -2.06
ACLYP53396 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.18□□□□□ -2.06
ACLYP53396 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.18□□□□□ -2.06
ACLYP53396 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
ACLYP53396 AC006199.1-201ENST00000548728 219 ntBASIC2.18□□□□□ -2.06
ACLYP53396 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.18□□□□□ -2.06
ACLYP53396 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.18□□□□□ -2.06
ACLYP53396 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.18□□□□□ -2.06
ACLYP53396 AC021739.1-201ENST00000559631 174 ntBASIC2.18□□□□□ -2.06
ACLYP53396 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.18□□□□□ -2.06
ACLYP53396 MIR5002-201ENST00000584713 97 ntBASIC2.18□□□□□ -2.06
ACLYP53396 MIR4781-201ENST00000585250 76 ntBASIC2.18□□□□□ -2.06
ACLYP53396 AL592221.1-201ENST00000605266 382 ntBASIC2.18□□□□□ -2.06
ACLYP53396 AC005332.10-201ENST00000612725 619 ntBASIC2.18□□□□□ -2.06
ACLYP53396 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms