Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2□□□□□ -2.09
CXCL12P48061 IGLV3-17-201ENST00000519099 244 ntBASIC2□□□□□ -2.09
CXCL12P48061 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2□□□□□ -2.09
CXCL12P48061 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2□□□□□ -2.09
CXCL12P48061 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2□□□□□ -2.09
CXCL12P48061 AC007115.1-201ENST00000546853 234 ntBASIC2□□□□□ -2.09
CXCL12P48061 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2□□□□□ -2.09
CXCL12P48061 AC002545.1-201ENST00000592511 181 ntBASIC2□□□□□ -2.09
CXCL12P48061 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2□□□□□ -2.09
CXCL12P48061 AC007038.2-201ENST00000608095 740 ntBASIC2□□□□□ -2.09
CXCL12P48061 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2□□□□□ -2.09
CXCL12P48061 AC244517.12-201ENST00000623581 663 ntBASIC2□□□□□ -2.09
CXCL12P48061 MIR203B-201ENST00000636080 86 ntBASIC2□□□□□ -2.09
CXCL12P48061 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2□□□□□ -2.09
CXCL12P48061 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2□□□□□ -2.09
CXCL12P48061 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
CXCL12P48061 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2□□□□□ -2.09
CXCL12P48061 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CXCL12P48061 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2□□□□□ -2.09
CXCL12P48061 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CXCL12P48061 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CXCL12P48061 AL139276.1-201ENST00000311910 1001 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 RNU6-1214P-201ENST00000363650 109 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 RNU6-660P-201ENST00000364566 109 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
CXCL12P48061 DEFA7P-201ENST00000382676 285 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 RNU6-217P-201ENST00000384164 104 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 MIR524-201ENST00000385242 87 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 SNORA17.3-201ENST00000391159 129 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 RNU2-33P-201ENST00000410344 192 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AL513331.1-201ENST00000411908 397 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.99□□□□□ -2.09
CXCL12P48061 RPL21P24-201ENST00000413752 448 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.99□□□□□ -2.09
CXCL12P48061 AL365496.1-201ENST00000426885 215 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AC009414.1-201ENST00000427200 443 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.99□□□□□ -2.09
CXCL12P48061 UBE2FP3-201ENST00000436366 524 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 LARP1BP3-201ENST00000437229 869 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AL354941.1-201ENST00000438600 464 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.99□□□□□ -2.09
CXCL12P48061 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.99□□□□□ -2.09
CXCL12P48061 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.99□□□□□ -2.09
CXCL12P48061 AC004263.1-201ENST00000479327 332 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AC109486.1-201ENST00000486833 374 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 RPS27P27-201ENST00000498779 255 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.99□□□□□ -2.09
CXCL12P48061 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CXCL12P48061 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.99□□□□□ -2.09
CXCL12P48061 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.99□□□□□ -2.09
CXCL12P48061 RN7SKP265-201ENST00000516448 223 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.99□□□□□ -2.09
CXCL12P48061 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.99□□□□□ -2.09
CXCL12P48061 AC068587.4-201ENST00000533893 186 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.99□□□□□ -2.09
CXCL12P48061 AC121758.2-201ENST00000553271 193 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.99□□□□□ -2.09
CXCL12P48061 AC090888.2-201ENST00000559765 1144 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AC018714.1-201ENST00000605028 208 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AC091965.4-201ENST00000607691 587 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.99□□□□□ -2.09
CXCL12P48061 AC010678.1-201ENST00000614118 713 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AC091834.1-201ENST00000614543 472 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AC108479.2-201ENST00000617314 601 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AL031667.3-201ENST00000620124 655 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AC007490.1-201ENST00000624321 703 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AC097655.1-201ENST00000635075 318 ntBASIC1.99□□□□□ -2.09
CXCL12P48061 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.99□□□□□ -2.09
CXCL12P48061 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CXCL12P48061 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.98□□□□□ -2.09
CXCL12P48061 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.98□□□□□ -2.09
CXCL12P48061 RNU6-140P-201ENST00000384566 108 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 MIR144-201ENST00000384886 86 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.98□□□□□ -2.09
CXCL12P48061 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.98□□□□□ -2.09
CXCL12P48061 VPS26BP1-201ENST00000417155 755 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.98□□□□□ -2.09
CXCL12P48061 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.98□□□□□ -2.09
CXCL12P48061 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CXCL12P48061 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.98□□□□□ -2.09
CXCL12P48061 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.98□□□□□ -2.09
CXCL12P48061 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.98□□□□□ -2.09
CXCL12P48061 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.98□□□□□ -2.09
CXCL12P48061 AL606662.1-201ENST00000445763 553 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 ELOCP30-201ENST00000447108 299 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 RPL12P25-201ENST00000455592 494 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.98□□□□□ -2.09
CXCL12P48061 MTND4LP3-201ENST00000468320 276 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 MRPL42P6-201ENST00000486397 371 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 RPS27P26-201ENST00000494583 239 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 AC138853.1-201ENST00000503549 823 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.98□□□□□ -2.09
CXCL12P48061 AC113155.1-201ENST00000511141 769 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 OR5BM1P-201ENST00000512021 366 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 SNORA25.15-201ENST00000516487 89 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 AP000907.2-201ENST00000530827 353 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.98□□□□□ -2.09
CXCL12P48061 VN1R80P-201ENST00000597126 338 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 AC234772.3-201ENST00000602277 528 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms