Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 MTND1P23-201ENST00000416931 372 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPN9P43378 TMEM167AP1-201ENST00000423409 219 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 RPL7P46-201ENST00000425129 740 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.31□□□□□ -1.88
PTPN9P43378 GTF2IP20-201ENST00000431663 360 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 RPS24P13-201ENST00000442520 397 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 FABP5P13-201ENST00000452144 328 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPN9P43378 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPN9P43378 AL162395.1-201ENST00000457882 422 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 RPL21P8-201ENST00000465083 535 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 AC034236.1-201ENST00000469891 373 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPN9P43378 TRBV1-201ENST00000476502 284 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 AC092989.1-201ENST00000481235 277 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 RPL38P4-201ENST00000502376 214 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 RNU6-123P-201ENST00000516163 102 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 RNA5SP380-201ENST00000517190 98 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPN9P43378 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPN9P43378 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPN9P43378 AC024940.5-201ENST00000622889 474 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPN9P43378 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.31□□□□□ -1.88
PTPN9P43378 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN9P43378 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN9P43378 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN9P43378 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
PTPN9P43378 RNU6-288P-201ENST00000363690 104 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 Y_RNA.245-201ENST00000364493 95 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 Y_RNA.295-201ENST00000364918 102 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 SNORA7.4-201ENST00000384249 137 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 RNVU1-14-201ENST00000384770 164 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 RNU6-550P-201ENST00000391057 101 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN9P43378 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPN9P43378 RPL32P35-201ENST00000415214 394 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.3□□□□□ -1.88
PTPN9P43378 MTND4P25-201ENST00000441039 533 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 PIGFP3-201ENST00000441918 722 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 AL118520.1-201ENST00000450770 291 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 FABP5P15-201ENST00000453566 214 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN9P43378 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN9P43378 AC091885.1-201ENST00000506658 268 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 AC074250.1-201ENST00000511117 192 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 RNA5SP471-201ENST00000516971 106 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 HMGB1P14-201ENST00000557424 591 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 AL138976.2-201ENST00000563989 694 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 BNIP3P9-201ENST00000603714 553 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 MIR7112-201ENST00000616126 65 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 AC110774.1-201ENST00000623567 2018 ntBASIC3.3□□□□□ -1.88
PTPN9P43378 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPN9P43378 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPN9P43378 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN9P43378 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPN9P43378 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPN9P43378 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PTPN9P43378 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPN9P43378 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PTPN9P43378 Y_RNA.38-201ENST00000362617 102 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTPN9P43378 SNORA1.3-201ENST00000384676 136 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PTPN9P43378 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTPN9P43378 FGF7P8-201ENST00000402994 292 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 AC092809.3-201ENST00000415453 231 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 MTCYBP8-201ENST00000422855 651 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 HMGN2P20-201ENST00000437531 273 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 RPS12P18-201ENST00000442381 270 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.29□□□□□ -1.88
PTPN9P43378 AC125238.1-201ENST00000448842 249 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.29□□□□□ -1.88
PTPN9P43378 SNRPFP3-201ENST00000457792 225 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 RN7SL863P-201ENST00000462370 296 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 EIF4EP3-201ENST00000498782 656 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 RBBP4P6-201ENST00000508098 202 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN9P43378 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN9P43378 RNU6-914P-201ENST00000516749 109 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 CASP1P1-201ENST00000526345 212 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTPN9P43378 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN9P43378 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPN9P43378 HIF1AP1-201ENST00000553642 175 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 AL133241.1-201ENST00000556832 487 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 AC074050.1-201ENST00000563247 211 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 AC234778.2-201ENST00000566241 354 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN9P43378 MIR5680-201ENST00000577577 84 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
PTPN9P43378 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.29□□□□□ -1.88
PTPN9P43378 MIR4424-201ENST00000585257 86 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPN9P43378 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.29□□□□□ -1.88
PTPN9P43378 SRGNP1-201ENST00000603392 451 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 AL138889.2-201ENST00000603883 242 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 AP000907.4-201ENST00000604143 237 ntBASIC3.29□□□□□ -1.88
PTPN9P43378 AC027309.3-201ENST00000623419 351 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms