Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SMIM11P1-201ENST00000369586 178 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 SNORA20.2-201ENST00000383922 131 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 RNU6-348P-201ENST00000384386 107 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 AL360182.1-201ENST00000397433 468 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 ZNF90P2-204ENST00000419323 1075 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 DLGAP5P1-201ENST00000430307 464 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.03□□□□□ -1.92
MTHFRP42898 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.03□□□□□ -1.92
MTHFRP42898 AC244505.4-201ENST00000434905 287 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.03□□□□□ -1.92
MTHFRP42898 SSXP5-201ENST00000443473 287 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 AC013267.1-201ENST00000458227 267 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.03□□□□□ -1.92
MTHFRP42898 RPS27P26-201ENST00000494583 239 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 ARL2BPP4-201ENST00000506854 471 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 SNORA31.3-201ENST00000516029 96 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 RNU6-1092P-201ENST00000516955 87 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 RNA5SP290-201ENST00000517133 127 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 HMGB1P41-201ENST00000520234 440 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
MTHFRP42898 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.03□□□□□ -1.92
MTHFRP42898 MIR3913-1-201ENST00000577744 102 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 AC098826.3-201ENST00000603823 466 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 AC098614.4-201ENST00000607601 462 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 AC006566.1-201ENST00000608943 513 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
MTHFRP42898 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.03□□□□□ -1.92
MTHFRP42898 AC009509.4-201ENST00000619202 509 ntBASIC3.03□□□□□ -1.92
MTHFRP42898 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
MTHFRP42898 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.03□□□□□ -1.92
MTHFRP42898 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.03□□□□□ -1.93
MTHFRP42898 FARSBP1-201ENST00000435808 1778 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
MTHFRP42898 HSPE1P11-201ENST00000339579 310 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.02□□□□□ -1.93
MTHFRP42898 SNORA75-201ENST00000384158 137 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 RNU6-140P-201ENST00000384566 108 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 RNU6-14P-201ENST00000384630 106 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 MIR767-201ENST00000390228 109 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 RNU2-52P-201ENST00000410680 190 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 RNU6-193P-201ENST00000410977 107 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.02□□□□□ -1.93
MTHFRP42898 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.02□□□□□ -1.93
MTHFRP42898 BX295541.1-201ENST00000417774 250 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 C1DP2-201ENST00000418167 426 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.02□□□□□ -1.93
MTHFRP42898 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.02□□□□□ -1.93
MTHFRP42898 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.02□□□□□ -1.93
MTHFRP42898 RPL31P35-201ENST00000431058 377 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 HMGB1P27-201ENST00000431429 603 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 RPS12P18-201ENST00000442381 270 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 NIPA2P5-201ENST00000452282 464 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 RPL12P25-201ENST00000455592 494 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.02□□□□□ -1.93
MTHFRP42898 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.02□□□□□ -1.93
MTHFRP42898 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.02□□□□□ -1.93
MTHFRP42898 MTND4P2-201ENST00000507767 1203 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.02□□□□□ -1.93
MTHFRP42898 Vault.3-201ENST00000516676 95 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 SUB1P1-201ENST00000524415 382 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
MTHFRP42898 AP002770.2-201ENST00000543613 532 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.02□□□□□ -1.93
MTHFRP42898 RPS3AP4-201ENST00000555161 764 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.02□□□□□ -1.93
MTHFRP42898 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 AC034102.8-201ENST00000615146 484 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 AC007318.2-201ENST00000620999 243 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.02□□□□□ -1.93
MTHFRP42898 MTND5P19-201ENST00000424872 1794 ntBASIC3.02□□□□□ -1.93
MTHFRP42898 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
MTHFRP42898 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.01□□□□□ -1.93
MTHFRP42898 UBE2L2-201ENST00000254302 429 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 RNU6-859P-201ENST00000362728 107 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 RNU6-288P-201ENST00000363690 104 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 RNU6-512P-201ENST00000364438 103 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 Y_RNA.245-201ENST00000364493 95 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 Y_RNA.359-201ENST00000365498 102 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 MIR9-1-201ENST00000385198 89 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 RNA5SP274-201ENST00000410484 108 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.01□□□□□ -1.93
MTHFRP42898 AC104651.1-201ENST00000427559 735 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.01□□□□□ -1.93
MTHFRP42898 AC073614.1-201ENST00000438690 650 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 HMGB3P12-201ENST00000438745 556 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.01□□□□□ -1.93
MTHFRP42898 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.01□□□□□ -1.93
MTHFRP42898 KLF3P2-201ENST00000465138 268 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.01□□□□□ -1.93
MTHFRP42898 RN7SL20P-201ENST00000488827 297 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 YWHAEP4-201ENST00000505390 198 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 MTND3P5-201ENST00000512798 333 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 RNU4-29P-201ENST00000515943 174 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 AP003033.1-201ENST00000527244 415 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.01□□□□□ -1.93
MTHFRP42898 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.01□□□□□ -1.93
MTHFRP42898 MIR3167-201ENST00000579623 85 ntBASIC3.01□□□□□ -1.93
MTHFRP42898 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms