Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL118508.4-201ENST00000624142 1176 ntBASIC0.89□□□□□ -2.27
CLIP1P30622 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CLIP1P30622 AC010329.5-201ENST00000623497 2174 ntBASIC0.89□□□□□ -2.27
CLIP1P30622 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CLIP1P30622 MTCYBP3-201ENST00000445588 1137 ntBASIC0.89□□□□□ -2.27
CLIP1P30622 snoU13.28-201ENST00000459235 104 ntBASIC0.89□□□□□ -2.27
CLIP1P30622 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.89□□□□□ -2.27
CLIP1P30622 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.89□□□□□ -2.27
CLIP1P30622 BNIP3P25-201ENST00000596023 559 ntBASIC0.89□□□□□ -2.27
CLIP1P30622 XIAPP1-201ENST00000603162 600 ntBASIC0.89□□□□□ -2.27
CLIP1P30622 AL078605.1-201ENST00000603529 500 ntBASIC0.89□□□□□ -2.27
CLIP1P30622 AC087045.1-201ENST00000605856 382 ntBASIC0.89□□□□□ -2.27
CLIP1P30622 AL031775.1-201ENST00000607014 887 ntBASIC0.89□□□□□ -2.27
CLIP1P30622 AC009229.3-201ENST00000608056 282 ntBASIC0.89□□□□□ -2.27
CLIP1P30622 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.88□□□□□ -2.27
CLIP1P30622 AL161651.1-201ENST00000440882 223 ntBASIC0.88□□□□□ -2.27
CLIP1P30622 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.88□□□□□ -2.27
CLIP1P30622 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.88□□□□□ -2.27
CLIP1P30622 AC036111.3-201ENST00000526389 112 ntBASIC0.88□□□□□ -2.27
CLIP1P30622 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.88□□□□□ -2.27
CLIP1P30622 SNRPGP16-201ENST00000533275 226 ntBASIC0.88□□□□□ -2.27
CLIP1P30622 AC004817.2-201ENST00000561794 651 ntBASIC0.88□□□□□ -2.27
CLIP1P30622 DUXAP11-201ENST00000603858 526 ntBASIC0.88□□□□□ -2.27
CLIP1P30622 AP003400.5-201ENST00000624827 617 ntBASIC0.88□□□□□ -2.27
CLIP1P30622 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.87□□□□□ -2.27
CLIP1P30622 SNORA8-201ENST00000384574 139 ntBASIC0.87□□□□□ -2.27
CLIP1P30622 MIR1197-201ENST00000408818 88 ntBASIC0.87□□□□□ -2.27
CLIP1P30622 RNU4-78P-201ENST00000410940 126 ntBASIC0.87□□□□□ -2.27
CLIP1P30622 AL591043.1-201ENST00000432461 424 ntBASIC0.87□□□□□ -2.27
CLIP1P30622 AC245047.4-201ENST00000433189 144 ntBASIC0.87□□□□□ -2.27
CLIP1P30622 DUXAP8-207ENST00000456786 622 ntBASIC0.87□□□□□ -2.27
CLIP1P30622 AC099513.1-201ENST00000490423 301 ntBASIC0.87□□□□□ -2.27
CLIP1P30622 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.87□□□□□ -2.27
CLIP1P30622 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.87□□□□□ -2.27
CLIP1P30622 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.87□□□□□ -2.27
CLIP1P30622 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.87□□□□□ -2.27
CLIP1P30622 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
CLIP1P30622 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
CLIP1P30622 RNU6-666P-201ENST00000363499 107 ntBASIC0.86□□□□□ -2.27
CLIP1P30622 MIR493-201ENST00000385254 89 ntBASIC0.86□□□□□ -2.27
CLIP1P30622 RPL37P10-201ENST00000412884 288 ntBASIC0.86□□□□□ -2.27
CLIP1P30622 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.86□□□□□ -2.27
CLIP1P30622 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.86□□□□□ -2.27
CLIP1P30622 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.86□□□□□ -2.27
CLIP1P30622 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.86□□□□□ -2.27
CLIP1P30622 AC015849.6-201ENST00000605454 474 ntBASIC0.86□□□□□ -2.27
CLIP1P30622 RNU6-338P-201ENST00000383888 105 ntBASIC0.85□□□□□ -2.27
CLIP1P30622 MIR92A1-201ENST00000385233 78 ntBASIC0.85□□□□□ -2.27
CLIP1P30622 RNU6-244P-201ENST00000391028 104 ntBASIC0.85□□□□□ -2.27
CLIP1P30622 RNA5SP127-201ENST00000411051 133 ntBASIC0.85□□□□□ -2.27
CLIP1P30622 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.85□□□□□ -2.27
CLIP1P30622 SCARNA11.3-201ENST00000517276 130 ntBASIC0.85□□□□□ -2.27
CLIP1P30622 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.85□□□□□ -2.27
CLIP1P30622 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CLIP1P30622 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.27
CLIP1P30622 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.84□□□□□ -2.27
CLIP1P30622 RNU6-697P-201ENST00000363348 107 ntBASIC0.84□□□□□ -2.27
CLIP1P30622 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.84□□□□□ -2.27
CLIP1P30622 AC098934.3-201ENST00000430450 190 ntBASIC0.84□□□□□ -2.27
CLIP1P30622 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.84□□□□□ -2.27
CLIP1P30622 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.84□□□□□ -2.27
CLIP1P30622 RNU6-229P-201ENST00000516614 102 ntBASIC0.84□□□□□ -2.27
CLIP1P30622 AC025423.2-201ENST00000537570 439 ntBASIC0.84□□□□□ -2.27
CLIP1P30622 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.84□□□□□ -2.27
CLIP1P30622 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.84□□□□□ -2.27
CLIP1P30622 AL355877.2-201ENST00000603670 358 ntBASIC0.84□□□□□ -2.27
CLIP1P30622 AC106800.4-201ENST00000614905 153 ntBASIC0.84□□□□□ -2.27
CLIP1P30622 RNU6-272P-201ENST00000411028 104 ntBASIC0.83□□□□□ -2.28
CLIP1P30622 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.83□□□□□ -2.28
CLIP1P30622 AL591704.1-201ENST00000432574 275 ntBASIC0.83□□□□□ -2.28
CLIP1P30622 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.83□□□□□ -2.28
CLIP1P30622 AL096803.2-201ENST00000450032 677 ntBASIC0.83□□□□□ -2.28
CLIP1P30622 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.83□□□□□ -2.28
CLIP1P30622 SNORA48.10-201ENST00000516965 160 ntBASIC0.83□□□□□ -2.28
CLIP1P30622 AC010186.2-204ENST00000537668 439 ntBASIC0.83□□□□□ -2.28
CLIP1P30622 AC019288.1-201ENST00000557918 224 ntBASIC0.83□□□□□ -2.28
CLIP1P30622 MIR3126-201ENST00000577443 74 ntBASIC0.83□□□□□ -2.28
CLIP1P30622 AC012213.4-201ENST00000606457 354 ntBASIC0.83□□□□□ -2.28
CLIP1P30622 AC027309.3-201ENST00000623419 351 ntBASIC0.83□□□□□ -2.28
CLIP1P30622 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.83□□□□□ -2.28
CLIP1P30622 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
CLIP1P30622 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CLIP1P30622 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CLIP1P30622 EDDM3CP-201ENST00000415977 425 ntBASIC0.82□□□□□ -2.28
CLIP1P30622 MTCO3P4-201ENST00000419236 787 ntBASIC0.82□□□□□ -2.28
CLIP1P30622 AC099548.1-201ENST00000421443 426 ntBASIC0.82□□□□□ -2.28
CLIP1P30622 MTCYBP29-201ENST00000436327 1006 ntBASIC0.82□□□□□ -2.28
CLIP1P30622 AL714022.1-201ENST00000439897 151 ntBASIC0.82□□□□□ -2.28
CLIP1P30622 FGF7P5-201ENST00000441829 291 ntBASIC0.82□□□□□ -2.28
CLIP1P30622 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.82□□□□□ -2.28
CLIP1P30622 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.82□□□□□ -2.28
CLIP1P30622 AC116337.2-201ENST00000477662 156 ntBASIC0.82□□□□□ -2.28
CLIP1P30622 CYCSP23-201ENST00000519781 313 ntBASIC0.82□□□□□ -2.28
CLIP1P30622 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.82□□□□□ -2.28
CLIP1P30622 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.82□□□□□ -2.28
CLIP1P30622 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC0.82□□□□□ -2.28
CLIP1P30622 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.82□□□□□ -2.28
CLIP1P30622 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.82□□□□□ -2.28
CLIP1P30622 AL713998.2-201ENST00000604538 1198 ntBASIC0.82□□□□□ -2.28
CLIP1P30622 DUXAP10-204ENST00000612052 616 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms