Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC068135.2-201ENST00000569293 1028 ntBASIC3.24□□□□□ -1.89
TM4SF1P30408 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.24□□□□□ -1.89
TM4SF1P30408 MIR3605-201ENST00000583214 100 ntBASIC3.24□□□□□ -1.89
TM4SF1P30408 AC064872.1-201ENST00000604823 1072 ntBASIC3.24□□□□□ -1.89
TM4SF1P30408 AC010678.1-201ENST00000614118 713 ntBASIC3.24□□□□□ -1.89
TM4SF1P30408 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.24□□□□□ -1.89
TM4SF1P30408 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TM4SF1P30408 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TM4SF1P30408 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.24□□□□□ -1.89
TM4SF1P30408 AC006020.1-201ENST00000420179 1854 ntBASIC3.24□□□□□ -1.89
TM4SF1P30408 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
TM4SF1P30408 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
TM4SF1P30408 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TM4SF1P30408 RNU6-288P-201ENST00000363690 104 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 RNU6-270P-201ENST00000364131 105 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 RNU6-512P-201ENST00000364438 103 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 SNORD114-30-201ENST00000364448 72 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 SMIM11P1-201ENST00000369586 178 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 RNU6-946P-201ENST00000383878 107 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 RNU6-1042P-201ENST00000384204 107 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 RNU6-297P-201ENST00000384636 107 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 MIR558-201ENST00000384920 94 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 MIR767-201ENST00000390228 109 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 RNU6-248P-201ENST00000410720 107 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.23□□□□□ -1.89
TM4SF1P30408 AC080125.1-201ENST00000414888 684 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.23□□□□□ -1.89
TM4SF1P30408 OR2B8P-201ENST00000432841 938 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 AL591212.2-201ENST00000433923 257 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.23□□□□□ -1.89
TM4SF1P30408 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.23□□□□□ -1.89
TM4SF1P30408 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.23□□□□□ -1.89
TM4SF1P30408 KLF3P2-201ENST00000465138 268 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 RAP1BP2-201ENST00000478270 544 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 AC006483.1-201ENST00000487308 313 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 RPS15AP34-201ENST00000487776 387 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
TM4SF1P30408 AC015712.3-201ENST00000559380 164 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.23□□□□□ -1.89
TM4SF1P30408 AC006362.1-201ENST00000567392 174 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 RSL24D1P11-201ENST00000591045 491 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 AL358072.1-201ENST00000604156 575 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 AC004805.2-201ENST00000605382 482 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 AC107294.3-201ENST00000609211 526 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TM4SF1P30408 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.23□□□□□ -1.89
TM4SF1P30408 SNORA50A-202ENST00000629536 136 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 MTND5P42-201ENST00000637720 498 ntBASIC3.23□□□□□ -1.89
TM4SF1P30408 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.23□□□□□ -1.89
TM4SF1P30408 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.23□□□□□ -1.89
TM4SF1P30408 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
TM4SF1P30408 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
TM4SF1P30408 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
TM4SF1P30408 AL390237.1-201ENST00000404226 1415 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
TM4SF1P30408 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TM4SF1P30408 MIR301A-201ENST00000385261 86 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 MIR764-201ENST00000390811 85 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 RNA5SP354-201ENST00000391247 136 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 RPS12P24-201ENST00000412619 387 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.22□□□□□ -1.89
TM4SF1P30408 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.22□□□□□ -1.89
TM4SF1P30408 GPR143P-201ENST00000434155 205 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.22□□□□□ -1.89
TM4SF1P30408 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.22□□□□□ -1.89
TM4SF1P30408 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.22□□□□□ -1.89
TM4SF1P30408 RPL12P25-201ENST00000455592 494 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 RPL7P5-201ENST00000471472 736 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 AP004217.1-201ENST00000480579 346 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 AC233702.1-201ENST00000482905 502 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 RN7SKP298-201ENST00000515950 94 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 RNA5SP471-201ENST00000516971 106 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 RNA5SP165-201ENST00000517142 115 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TM4SF1P30408 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.22□□□□□ -1.89
TM4SF1P30408 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.22□□□□□ -1.89
TM4SF1P30408 AC009063.1-201ENST00000563342 702 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 AC119751.7-201ENST00000600494 245 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 AL133393.1-201ENST00000603277 287 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 AC073648.5-201ENST00000603502 305 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 AC006566.1-201ENST00000608943 513 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TM4SF1P30408 AC008498.1-201ENST00000613012 531 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 AL359547.2-201ENST00000615810 418 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 AC009090.3-201ENST00000616553 565 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 AC048344.4-201ENST00000619744 527 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 AC068880.5-201ENST00000624331 290 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.22□□□□□ -1.89
TM4SF1P30408 AC091564.4-201ENST00000533934 2194 ntBASIC3.22□□□□□ -1.89
TM4SF1P30408 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.22□□□□□ -1.89
TM4SF1P30408 AC008669.1-201ENST00000565823 2178 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
TM4SF1P30408 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TM4SF1P30408 RPL9P7-201ENST00000330965 580 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 RNU6-188P-201ENST00000364207 107 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 MIR1289-2-201ENST00000408360 111 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 RNU6-195P-201ENST00000411352 109 ntBASIC3.21□□□□□ -1.9
TM4SF1P30408 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.21□□□□□ -1.9
TM4SF1P30408 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms