Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 RPS15AP6-201ENST00000420703 385 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 AL158156.1-201ENST00000422509 473 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 AL139247.1-201ENST00000422768 325 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 AL591419.1-201ENST00000427423 339 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 Z82210.1-201ENST00000440037 231 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 HMGN2P16-201ENST00000456802 261 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 RPS4XP2-201ENST00000458402 793 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 RPL21P104-201ENST00000464143 478 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.47□□□□□ -1.85
EPHA3P29320 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.47□□□□□ -1.85
EPHA3P29320 AC139453.3-201ENST00000493276 369 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.47□□□□□ -1.85
EPHA3P29320 RNU2-27P-201ENST00000516185 142 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 RN7SKP21-201ENST00000516503 220 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 RNU6-1069P-201ENST00000516612 133 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.47□□□□□ -1.85
EPHA3P29320 CASP1P1-201ENST00000526345 212 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.47□□□□□ -1.85
EPHA3P29320 HPRT1P3-201ENST00000539521 576 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.47□□□□□ -1.85
EPHA3P29320 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.47□□□□□ -1.85
EPHA3P29320 MIR3160-1-201ENST00000577972 85 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.47□□□□□ -1.85
EPHA3P29320 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.47□□□□□ -1.85
EPHA3P29320 AL020997.2-201ENST00000602607 184 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 FAM157A-202ENST00000615155 405 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 ZYXP1-201ENST00000617638 118 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
EPHA3P29320 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
EPHA3P29320 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
EPHA3P29320 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
EPHA3P29320 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
EPHA3P29320 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.46□□□□□ -1.85
EPHA3P29320 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
EPHA3P29320 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
EPHA3P29320 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.46□□□□□ -1.86
EPHA3P29320 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
EPHA3P29320 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
EPHA3P29320 MIR372-201ENST00000362225 67 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 SNORD3E-201ENST00000362899 217 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 RNU6-266P-201ENST00000364225 107 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 RNU2-37P-201ENST00000410695 177 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.46□□□□□ -1.86
EPHA3P29320 NCOR1P3-201ENST00000420479 303 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 AC017083.1-201ENST00000428093 483 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 AC006539.3-201ENST00000454258 129 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 AC233279.1-201ENST00000455300 423 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 AC104472.2-201ENST00000469035 601 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 RPS23P3-201ENST00000470993 430 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 RN7SL442P-201ENST00000473804 320 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 AL135752.1-201ENST00000479477 471 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 FTH1P9-201ENST00000513251 355 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 RNA5SP165-201ENST00000517142 115 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.46□□□□□ -1.86
EPHA3P29320 RNU6-323P-201ENST00000521915 107 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.46□□□□□ -1.86
EPHA3P29320 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
EPHA3P29320 CYCSP30-201ENST00000546447 172 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.46□□□□□ -1.86
EPHA3P29320 AC087499.8-201ENST00000578406 226 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.46□□□□□ -1.86
EPHA3P29320 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.46□□□□□ -1.86
EPHA3P29320 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 AC136601.2-201ENST00000604356 474 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 RNU1-30P-201ENST00000606575 163 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 AC135507.2-201ENST00000612443 309 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 AL110115.1-201ENST00000614396 364 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 AL031601.2-202ENST00000622650 282 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 AC048347.1-201ENST00000624621 427 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.46□□□□□ -1.86
EPHA3P29320 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.46□□□□□ -1.86
EPHA3P29320 AL672296.1-201ENST00000427780 2158 ntBASIC3.46□□□□□ -1.86
EPHA3P29320 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
EPHA3P29320 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.46□□□□□ -1.86
EPHA3P29320 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
EPHA3P29320 AC116096.1-201ENST00000566804 2314 ntBASIC3.45□□□□□ -1.86
EPHA3P29320 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
EPHA3P29320 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
EPHA3P29320 AL513302.2-201ENST00000562313 1842 ntBASIC3.45□□□□□ -1.86
EPHA3P29320 RNU6-395P-201ENST00000365662 106 ntBASIC3.45□□□□□ -1.86
EPHA3P29320 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
EPHA3P29320 PPIAP31-201ENST00000405422 495 ntBASIC3.45□□□□□ -1.86
EPHA3P29320 MIR548F5-201ENST00000408421 86 ntBASIC3.45□□□□□ -1.86
EPHA3P29320 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.45□□□□□ -1.86
EPHA3P29320 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.45□□□□□ -1.86
EPHA3P29320 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.45□□□□□ -1.86
EPHA3P29320 AL117339.2-201ENST00000430475 180 ntBASIC3.45□□□□□ -1.86
EPHA3P29320 AL512844.2-201ENST00000433990 593 ntBASIC3.45□□□□□ -1.86
EPHA3P29320 HMGB1P12-201ENST00000438594 598 ntBASIC3.45□□□□□ -1.86
EPHA3P29320 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
EPHA3P29320 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.45□□□□□ -1.86
EPHA3P29320 AL136097.1-201ENST00000456945 913 ntBASIC3.45□□□□□ -1.86
EPHA3P29320 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.45□□□□□ -1.86
EPHA3P29320 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.45□□□□□ -1.86
EPHA3P29320 AC008716.1-201ENST00000511084 513 ntBASIC3.45□□□□□ -1.86
EPHA3P29320 RNU6-566P-201ENST00000516790 107 ntBASIC3.45□□□□□ -1.86
EPHA3P29320 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.45□□□□□ -1.86
EPHA3P29320 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.45□□□□□ -1.86
EPHA3P29320 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms